Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1168 ATGGCGGAACCAACGGAACCATGCACGTCTTCTTCATTGGGGAGGGACCCAAGCACCGTGATTCACCCAAGACGCGAGCCCTTCGAGCACGGCCTCTTGCCAATCCCACGCCTCATCTTCTCCGGCCCCACGCAAACCCTAATTCCGTTGAAGCAGAAACTACTAGAATTATCCTCCAACCACCGAGTCAACTCCGAGGCCATCTCCGAGTCGTTGCAGATCTCCATTGAGCACGCCAGACTCGTCCTCACTACCCTTGCCTCGGTTCTGCACTCCGATTCTGAACCTCTCGTCTCTGCCAAGCTCGACGAAATCGACGCCGTCGGCGCCGATGTCCATGATCTGGTTTTGTTCCTCTATATTCAATCCTACAAGAGGCTCCTGCCGCGGACGCACAAGGACTCCGTCGCCGTCGCCGATGTCTGGCCTTCAACTTCAGCCTTCGATGGCTACTTATCCGCTCTGTCGCCGCTTCAGCTTGTGCGCAGCAACACTAGGCGGTTCATGCCATCGCAGGCTGATGAAGAGGTACATCAGTTATCATATCTGCAAAAGCACTTGGCTAACATCCTGTCCCTTCTAGCTGAGCCTGCAGAGGGGGAAGGGGAAGAATCTCTGGTTTGTTTATTTATTGTTTTAACCATGGATAGATTTGAGCATCTTGGTTTTCTAATTCAGTTTGGTGATAAGGGATCTGAAGGAAATTCTTTGAGTCAATCTTCTCCCTTTTTTGCAAACTCAGACCCTGACATGCCTGCTGTTCCAGTTCCTGCTACACAAATTCATGATTGGCTTCTGCAGAATATAGCTGCTGCTTTGGAATATATTTCTGAACGGACTTCTTCAAAGGAAAATGGCCCAGCTAGTGCCTCTGATCAGGATGTTACTATGACTGATGCATGCACTGTCTCAGTCAATAAGGTCTCAGCTAGTAGTAGAGGTGCAAGTTTCGTTGAAGGGATCTCTAAATCGTCTTATGTAAAGCATGCACCTGACATTAAAGGTTCCTCTGTTAAGGTTCTAAATTGCCATGAGTCTGCCATCTACATCTTAGCACCTTTGAGATTTGCCACTGTGTATGGATGTTCAGATGCAACAATAGTTCTAGGAGCAGTTGGGAAGGCTGTGAGAGTGGAACACTGTGAACGGGTTCATGTAATTGTAGCAACAAAACGTATTTGTATTGCTAACTGTCGTGAATGTGTTTTCTTTTTGGGAGTGAACCAGCAACCTCTTATTATTGGTGATAACCATAAACTGCAGGTGGCTCCATATAATACTTTTTACACTCAATTGGAGGAGCATATGAATGAGGTTGGAATTGTACCCACAGTTAACCGGTGGGATGAACCTCTAGCATTGAGCATGGTTGATCCCCATGATTCATTATCTCATCCAGCGGGTGTGTCTGATGTTCAAGCTGAGTCTGCTACTCGAGTGGACCCTGATCAATTCACTAATTTTGTGATACCAAATTGGCTTGGAGGAGAGTCTACTGGGTCAACGAAAGACAACCCATTCACACTACCAGATGCTTATGTGGCATCTCAGCAAAAAAATCAAAAAAATTTAGGGGAGATAAGGCAACTCCTACGAGAAGCACCTTTAGATGAAAGTCGTAAGCGAGAATTGTCATCTGCACTCCATGTGTATTTCAAAGACTGGTTATATGCTTCCGGAAACATTCGTCAGCTCTATTGTCTACAAGGCGATTGA 1716 0.4656 MAEPTEPCTSSSLGRDPSTVIHPRREPFEHGLLPIPRLIFSGPTQTLIPLKQKLLELSSNHRVNSEAISESLQISIEHARLVLTTLASVLHSDSEPLVSAKLDEIDAVGADVHDLVLFLYIQSYKRLLPRTHKDSVAVADVWPSTSAFDGYLSALSPLQLVRSNTRRFMPSQADEEVHQLSYLQKHLANILSLLAEPAEGEGEESLVCLFIVLTMDRFEHLGFLIQFGDKGSEGNSLSQSSPFFANSDPDMPAVPVPATQIHDWLLQNIAAALEYISERTSSKENGPASASDQDVTMTDACTVSVNKVSASSRGASFVEGISKSSYVKHAPDIKGSSVKVLNCHESAIYILAPLRFATVYGCSDATIVLGAVGKAVRVEHCERVHVIVATKRICIANCRECVFFLGVNQQPLIIGDNHKLQVAPYNTFYTQLEEHMNEVGIVPTVNRWDEPLALSMVDPHDSLSHPAGVSDVQAESATRVDPDQFTNFVIPNWLGGESTGSTKDNPFTLPDAYVASQQKNQKNLGEIRQLLREAPLDESRKRELSSALHVYFKDWLYASGNIRQLYCLQGD* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1168 571 PANTHER UNCHARACTERIZED 16 571 IPR039589 -
Apr4g1168 571 PANTHER BNAC04G02540D PROTEIN 16 571 - -
Apr4g1168 571 MobiDBLite consensus disorder prediction 1 21 - -
Apr4g1168 571 ProSiteProfiles C-CAP/cofactor C-like domain profile. 297 441 IPR017901 -
Apr4g1168 571 Gene3D - 315 482 IPR016098 -
Apr4g1168 571 MobiDBLite consensus disorder prediction 1 17 - -
Apr4g1168 571 Pfam Tubulin binding cofactor C 335 450 IPR012945 -
Apr4g1168 571 SMART carp 343 380 IPR006599 -
Apr4g1168 571 SMART carp 381 415 IPR006599 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1168 Apr-Chr4 10017652 10028181 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1168 K16810 - gmx:100819271 1030.01