Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1148 ATGGGGGCTGGTGGCCGAACCTCTGCTCCTCCTTCCAACAGGAAGTCAGAGGCTGATACTGTCAAGCGAGTGCCATTTGCAAAACCTCCGTTCAGTCTCAGCCAGATCAAGAAGGCCATTCCACCTCATTGTTTTCAGCGCTCTGTTCTCCGTTCATTCTCCTATGTCATTTATGACCTCACCATTGCTTTCTGCCTCTATTACGTTGCCACCCATTACTTCCACCACCTTCCTCGCCCTCTCTCTCTCTTGGCCTGGCCAATCTACTGGGCTGTCCTAGGTTGCATCCTCACCGGCGTTTGGGTTATTGCCCATGAGTGTGGCCACCATGCATTCAGTGACTACCAGTTGCTTGATGATATTGTTGGCCTTGTTCTCCACTCTGCTCTTCTAGTCCCTTACTTTTCATGGAAATACAGCCATCGCCGCCACCACTCCAACACCGGTTCTCTTGAGCGGGATGAAGTGTTTGTTCCGAAGCAGAAGTCCCGTATGAAGTGGTACTCTAAATACCTTAACAATCCACCAGGCAGAGTCCTCACACTTGCTATCACCCTCACTCTGGGTTGGCCCATGTATTTGGCTTTTAATGTTTCAGGTAGACCTTACGAAAGGTTCGCTTGCCACTATGACCCTTATGGTCCCATCTACTCCGATCGTGAACGCCTTCAAATATATATATCAGATGTGGGAGTACTTGCAGTATGCTATGGGCTTTTCCATCTTGTCATGGCAAAAGGGCTTGCCTGGGTTGTGTGTGTTTATGGAGTTCCATTGCTGGTGGTCAATGGATTTTTGGTGTTGATTACATATTTGCAGCATACACACCCTGCTTTACCACATTATGATTCGTCTGAGTGGGACTGGTTGAGAGGAGCATTAGCAACAGTGGATAGAGATTATGGAATCCTGAACAAGGTCTTCCACAATATTACCGACACTCATGTGGCGCATCACTTGTTCTCCACTATGCCACATTATCATGCAATGGAGGCCACAAAGGCAATCAAGCCAATTTTGGGAGAATATTATCGCCTTGACGAGACCCCAATTTACAAGGCAATGTGGAGAGAGGCAGGAGAATGTATTTATGTTGAGCCAGATCAAAGTAATCAGAGCAAAGGTGTATTTTGGTACAACAATAAGTTGTGA 1152 0.4705 MGAGGRTSAPPSNRKSEADTVKRVPFAKPPFSLSQIKKAIPPHCFQRSVLRSFSYVIYDLTIAFCLYYVATHYFHHLPRPLSLLAWPIYWAVLGCILTGVWVIAHECGHHAFSDYQLLDDIVGLVLHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSRMKWYSKYLNNPPGRVLTLAITLTLGWPMYLAFNVSGRPYERFACHYDPYGPIYSDRERLQIYISDVGVLAVCYGLFHLVMAKGLAWVVCVYGVPLLVVNGFLVLITYLQHTHPALPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYRLDETPIYKAMWREAGECIYVEPDQSNQSKGVFWYNNKL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1148 383 Pfam Domain of unknown function (DUF3474) 24 66 IPR021863 GO:0016717
Apr4g1148 383 Pfam Fatty acid desaturase 85 345 IPR005804 GO:0006629
Apr4g1148 383 CDD Delta12-FADS-like 47 329 - -
Apr4g1148 383 PANTHER OLEATE HYDROXYLASE FAH12 1 383 - -
Apr4g1148 383 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 1 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1148 Apr-Chr4 9787139 9793514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1148 1 383 Lipid Metabolism Gene Families AT3G12120 76.240 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1148 K10256 - gmx:547815 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1148 4 9787139 9793514 Apr4g1148 4 9787139 9793514 ECH
Apr4g1148 4 9787139 9793514 Apr8g0758 8 7550988 7552145 PCT