Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1142 ATGAACAACGCCATCTTCAAAGTCGCAAACACCAATCATCACCATTTCTCTCTTAGGGCTGCACTCTTTCATTCCACTCCTATCTTGCAGCGTAAACGGCGCAACTTTTGGGACTCTAGAGGCAACAACCATTACTCGAGAAGATTTAGAAGGATGCAGGGAAAACAAAAAATATTGCGCAGTGTCAATGATTATGCAGAATTTCTGTTTCAGAAATGGAAGGGAAATATTGATGAGGATGATCCATCATCAAGTCGAGGCACCTCATGGTTTAGCCAACAATATTCTGATAGGGGCTCTGGAAGGTACAGGAATGGCAATCGTGGATCAAGTCACCGCTACAAAAGAGATCCTTTGTTTTGTGAAGATGATTTTGATGTCGAAACCATTTTCCGTTCTGCCTTTGGTGGGAATAGATTTTTCTATTGGTCATTCATCAATGAGGAGAATCCTCAGTGGAGGAGGTCTGAACGCTTTTCTAATTATGGGAAATCTTGGAACTGGAGACATCGGAACGAAAATGATTATGACTCTGCATCTGAGTCTGATAGCTCAGATTCTGATCTAGCTCCTGATAGATTAGCCCTCGGATTGAGTGTTTCTGGTCCTCTAAAACTTGAAGATGTAAAAAATGCGTACCGGGCGTGTGCCCTAAAGTGGCATCCAGATCGTCATCAAGGCTCTTCCAAGGCTATGGCAGAAGAGAAGTTCAAGCATTGCAGTGCTGCTTATCAATCTTTATGTGATAAGCTGGCCTTGGATTAA 765 0.4275 MNNAIFKVANTNHHHFSLRAALFHSTPILQRKRRNFWDSRGNNHYSRRFRRMQGKQKILRSVNDYAEFLFQKWKGNIDEDDPSSSRGTSWFSQQYSDRGSGRYRNGNRGSSHRYKRDPLFCEDDFDVETIFRSAFGGNRFFYWSFINEENPQWRRSERFSNYGKSWNWRHRNENDYDSASESDSSDSDLAPDRLALGLSVSGPLKLEDVKNAYRACALKWHPDRHQGSSKAMAEEKFKHCSAAYQSLCDKLALD* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1142 254 Pfam DnaJ domain 198 250 IPR001623 -
Apr4g1142 254 PRINTS DnaJ domain signature 195 213 IPR001623 -
Apr4g1142 254 PRINTS DnaJ domain signature 213 228 IPR001623 -
Apr4g1142 254 PRINTS DnaJ domain signature 232 252 IPR001623 -
Apr4g1142 254 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 6 253 - -
Apr4g1142 254 SUPERFAMILY Chaperone J-domain 198 250 IPR036869 -
Apr4g1142 254 CDD DnaJ 198 249 IPR001623 -
Apr4g1142 254 Gene3D DnaJ domain 195 249 IPR036869 -
Apr4g1142 254 SMART dnaj_3 190 252 IPR001623 -
Apr4g1142 254 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 6 253 - -
Apr4g1142 254 MobiDBLite consensus disorder prediction 78 111 - -
Apr4g1142 254 ProSiteProfiles dnaJ domain profile. 191 252 IPR001623 -
Apr4g1142 254 MobiDBLite consensus disorder prediction 82 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1142 Apr-Chr4 9746494 9752229 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1142 - - gmx:100807880 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1142 4 9746494 9752229 Apr4g1142 4 9746494 9752229 ECH