Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1139 ATGGAGAAGATTGAACACTTCAGCCATATCCACCCTCTACTGTTAAAGGAAGAACAGAAAAATAAATACCAACAAGCCCTTTGCTCAGGTTGTGAAAAAACAATTTCAGGTCCTGTCTTCTGCTGCGACATATGCAACTATGTCCTTCACAAAACATGCGCAGAACTTCCACGCTACATGAAGCACCCATATCACCCTCAACACCCTCTTATTCTCCTTTCTACCAATCCTTACAAGGGAAACTGTATATGTGATGCTTGTTTTGGCATCTTCAACAACTTCGTATATCATTGTTATCATTGTCAATATGATCTTGACACTACGTGTGCCTCTCGGTGGCAGCCAGATGATGGCCATAAGCATGCCTTCTTGGTCTTGACAAATTCACAATCGTTTATTTGTTATGCTTGTGGCATGGAAATAAACGAGACCAGTGCATGCTTATGCACCATTTGTCAGATTTGGGTTCATTCTAGCTGCGCTGCATTGCCTCTTGCTATTAGATTAGATGGCCACCCACACCGTTTGAAGCTCACTTATTCCCTTCATCATGTTTATGGTTTTTGGGGTGTCTTAACTTGTGGTGCTTGTGATGGATATATGAGTTCAGCTTTTGCGGGTTATTTTTGTTCATCTTGCAAATTCCCCGTGCATTTGAAGTGTCCACAACAATATTCAAGAGAAGAGTGCGAGACCGCAACAGAAGATGAGGAAGAGGAATCATTCATAGACTCGGAAAGTAAGCACTCCCAGGATATTGTTGGTTTTAGTGTCTTCAGTCATGAACATTTGTTGAAGTTCATAGAGGATAAGAGTACTCAGCAATATGCTGATGAACTCTGTGATGGGTGTGTTCAACCTATCACGCCAACTTTCTTTTCTTGTGAAGAAGAAAAATGTGGTTTCAAGTTGCACCAAAGTTGTGCTGATTTACCAAGAACGAGGCAACACCCTTTTCATGTGCACTCTTTAACTCTTCTCTCAAAGGCTCCTTATGATGGCATTTTTAGGTGTGATGCATGCAGATCATTGAACAATGGCTTTGTGTATCGTTGTGGTGAGTGTCAATTCGACCTTGATGTTTGTTGTGGTTTTCTTGAAGAGAGAGTTGAACACCAAAGTCACAAGCACCCCCTTTTCCTTAAGAAGACAAGCATAGCTAGGCAATGCAAAGGTTGTCATATTTGGTCTAGTCATGTGTATGTCTGTGATGTTTGTGAGGATTTTGCTATTGATTGTGGGTGTGTTTCTCTGCCGTGTAAGGCGTGGCACGTGAATGATAAGCATCCTCTTAGTCTAACCTATTTTGTTGAAGGGGATTTGAGGGAATATGAATGTGGCATTTGCAATGAGAAAGTGTCTTCGAAGCAATGGTTTTATTTCTGTGATGACTGTGACTTCGCTTCTCATCCGTATTGTGTTCTTGGCAAGTCTAAGCGTGTTAAGTTCGGAGGTAGTTTCCAATATGATGTTCATTCACACCCTCTTGCTTTGGTTGAAGGAACTGAGCAGAACAAGACATGCGAAGCATGTGGTGAATTGTGCAACGGGTGGACCCTTGAGTGTGGGGAATGCAAATGCTACTTCCACAGAGAAGGACAGTGTTTCTGGGAACAATTTAAGAAGAGCGCAAAGTATTTGGCATTATCAGGAATGGCGAGGCAGAGGTACGCAGCAAACGTATTGGCTTCCACGCCCAATGTAACCACGAAGTGA 1716 0.4237 MEKIEHFSHIHPLLLKEEQKNKYQQALCSGCEKTISGPVFCCDICNYVLHKTCAELPRYMKHPYHPQHPLILLSTNPYKGNCICDACFGIFNNFVYHCYHCQYDLDTTCASRWQPDDGHKHAFLVLTNSQSFICYACGMEINETSACLCTICQIWVHSSCAALPLAIRLDGHPHRLKLTYSLHHVYGFWGVLTCGACDGYMSSAFAGYFCSSCKFPVHLKCPQQYSREECETATEDEEEESFIDSESKHSQDIVGFSVFSHEHLLKFIEDKSTQQYADELCDGCVQPITPTFFSCEEEKCGFKLHQSCADLPRTRQHPFHVHSLTLLSKAPYDGIFRCDACRSLNNGFVYRCGECQFDLDVCCGFLEERVEHQSHKHPLFLKKTSIARQCKGCHIWSSHVYVCDVCEDFAIDCGCVSLPCKAWHVNDKHPLSLTYFVEGDLREYECGICNEKVSSKQWFYFCDDCDFASHPYCVLGKSKRVKFGGSFQYDVHSHPLALVEGTEQNKTCEACGELCNGWTLECGECKCYFHREGQCFWEQFKKSAKYLALSGMARQRYAANVLASTPNVTTK* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1139 571 Pfam C1 domain 63 110 IPR004146 -
Apr4g1139 571 Pfam C1 domain 259 309 IPR004146 -
Apr4g1139 571 Pfam C1 domain 7 54 IPR004146 -
Apr4g1139 571 Pfam C1 domain 318 363 IPR004146 -
Apr4g1139 571 Pfam C1 domain 172 221 IPR004146 -
Apr4g1139 571 Pfam C1 domain 428 474 IPR004146 -
Apr4g1139 571 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 173 230 IPR002219 -
Apr4g1139 571 SUPERFAMILY Cysteine-rich domain 395 480 IPR046349 -
Apr4g1139 571 SUPERFAMILY Cysteine-rich domain 31 113 IPR046349 -
Apr4g1139 571 SMART c1_12 494 539 IPR002219 -
Apr4g1139 571 SMART c1_12 172 230 IPR002219 -
Apr4g1139 571 SMART c1_12 119 166 IPR002219 -
Apr4g1139 571 SMART c1_12 7 58 IPR002219 -
Apr4g1139 571 SUPERFAMILY Cysteine-rich domain 491 531 IPR046349 -
Apr4g1139 571 SUPERFAMILY Cysteine-rich domain 146 222 IPR046349 -
Apr4g1139 571 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 8 535 - -
Apr4g1139 571 SMART PHD_3 445 493 IPR001965 -
Apr4g1139 571 SMART PHD_3 280 342 IPR001965 -
Apr4g1139 571 SMART PHD_3 27 88 IPR001965 -
Apr4g1139 571 SMART PHD_3 133 214 IPR001965 -
Apr4g1139 571 ProSitePatterns Zinc finger phorbol-ester/DAG-type signature. 183 230 IPR002219 -
Apr4g1139 571 SUPERFAMILY Cysteine-rich domain 292 377 IPR046349 -
Apr4g1139 571 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 8 535 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1139 - - gmx:121174110 939.488