Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1129 ATGGAGGAAGAAGAAGACCAACAGAAGCTTCCAGATCTGGTGAAAGAACTAGTTCACCGCTTACTCTCTCAGAACCTACCCCCAAATTCCCCACCTCCAAACCCTAACTCCCCCGAATTCCAAAACTCCCTCCGCTACGCCCTCCGCATCCTCTCCAGCCGCCTCACCCCCTCCGTCGCCCCCGACGCCGCCGCCATCGCCGACTCCATCAAGCGCCGCCTCGCTACCCAAGGCCGCTCCGCCGAAGCTCTCTCCTTCGCCGACCTATACACCAAATTCGCCTCCAAAGCCAAAAGCGTTAACAACAAATGGGCCGTTATCTACCTCCTCAAAATCATTTCCCAGGATCGCCACAACACCACCACCACCACCAACCACCACTTCCATTCCCCTCTTCTCTTGCCCAATCTCGCTTTCTCCGACACCGCCAAGGGCTGGAACAACGGTGTTTTATTGGTTTCCAAGGATCCCGAGAATCGCCGCGACATTGCGTTTCGCGAGTTCGTTAATTTGGTTAAGGAGGAGAATGAGGTCTCCGAGGAGGTTTTGGTTAGGGATGTGCTCTATGCTTGTCAAGGAGTTGACGGCAGGTATGTGAAATTTGAGAGCGGGAATAGTTGTTATGCGTTGTTGGATTCGATTAGGGTTCCTAGAGCTACTAGGAGTATGGTTCATAAGCTTTGTGAATTGGGGTCTTTATTTAAGAAGGTTACTGGGTACATATGGCAGAGTATGGATAGGTTTCCTGCGGAAGATGTGGGGACTGTGGGGCAAGCTTTTTGTTCTGCTTTGCAGGATGAGCTTAGTGAGTATTACAAGTTGTTGGCAGTGCTTGAGGCTCAGTCTTCGAACCCGATTCCTTTGGTTTCGGAATCCGCGAGTTCTGGGAATTATCTTTCCTTGAGGAGATTAGCTGTCTGGCTTGCGGAGCCGATGGTGAAGATGAGGTTGATGGCTGATTTGGTTGATAAGTGCAGGGTGTTGCATGGCGGGGCAATGGCTGGTGCGATTCATTTGCATGCTCAACATGGGGATCCGCTGGTTCATGAGTTCATGAGGAGGTTGTTGCAGCGTGTGTGTTCTTCGCTGTTTGAAATGGTCAGGAGGTGGGTATTGGAAGGGGAGTTGGAGGATATCTTTAATGAGTTTTTCATTGTCGGTCAGCCTGTGAAAGCTGAGTCTCTTTGGAGAGAAGGGTATAGGCTGCATGATGCCATGCTTCCTTTGTTCATTTCGCCTTCTCTTGCGCAGAGGATCTTGAGGACTGGCAAGTCCATTAATTTTCTGCGTGTGTGTTGCGAGGACCGCGGTTGGGCTGATGCTGCAACTGAGGCTGCAACTGATACTGGGGCAGCTGCGAGAAGAGGTGGTTTTGGATATGGTGAAACTGATACCCTTGAGTCCCTGGTGGATGAAGCTTCAAAGAGGATTGACAAGCATCTATTGGATGTGATTTTCAGGAGGTACAAGTTCAAAGAACACTGCCTAGCAATTAAGCGGTATTTGTTGCTTGGCCAAGGTGATTTTGTGCAGTATCTAATGGACATTGTTGGGCCTGAACTTTCTGAGCCAGCTAATACTATAAGCTCCTTCAAACTTTCGGGATTGCTGGAAACTGCAATAAGGGCATCCAATGCTCAGTATGATGATCCTGACATTTTGGATAGGCTCAGGGTTAAAATGATGCCGCATGAAAGTGGTGATAGGGGTTGGGATGTATTTTCACTGGAATATGATGCAAGAGTTCCACTGGATACTGTGTTCACGGAGTCTGTGATGGCAAGGTATTTGAGAATTTTTAACTTTCTGTGGAAGCTTAGAAGAGTGGAACATGCGCTTACCGGTGCCTGGAAGACCATGAAACCAAATTGCATTACTTCTAATTCCTTTACCAGATTGCAACATGCAGTAAAGATGCAGTTAGTTTCAACATTGAGGCGCTGCCAGGTTCTTTGGGTTGAAATTAATCACTTCATTTCCAACTTGCAATATTATATAATGTTTGAAGTCTTGGAGATATCATGGTCAAACTTTTTAAGTGAGATGGAAGTAGCCAAGGATCTTGATGATCTACTTGCAGCTCATGAGAAATATCTGCATTCCATTGTGGAGAAGTCTCTCCTGGGAGAGCTATCCCAGTCCCTTTATAAGTCACTATTTGTAATTTTTGATCTTATATTACGTTTTCGGAGCCGCGCAGATCGGCTGTATGAAGGTATTCATGAGTTGCAAGCAAGAATCACAGAATCCTCCCAATCCTCTCGAGACCAGAATAAATCACGAAAGCAAGTGAATGATAAGTCTGTAGAACAAGGATCCTGGATTGCTGAGGGGAGGAAAGCCCTAACACAACGAGCTGGGGAATTTCTTCGAAATATGGGACAAGATCTGGATGCAATTGCAAAGGAGTATTCATCGTTGCAAGAGGATTTCATTTCTCAGTTGCCTGTACAGCAACATGTTGATCTGAAGTTTCTCTTTTTCCGTCTTGACTTCAACGAATTTTATAGGCGGTTGTGTCCTAGCGTATAG 2532 0.4688 MEEEEDQQKLPDLVKELVHRLLSQNLPPNSPPPNPNSPEFQNSLRYALRILSSRLTPSVAPDAAAIADSIKRRLATQGRSAEALSFADLYTKFASKAKSVNNKWAVIYLLKIISQDRHNTTTTTNHHFHSPLLLPNLAFSDTAKGWNNGVLLVSKDPENRRDIAFREFVNLVKEENEVSEEVLVRDVLYACQGVDGRYVKFESGNSCYALLDSIRVPRATRSMVHKLCELGSLFKKVTGYIWQSMDRFPAEDVGTVGQAFCSALQDELSEYYKLLAVLEAQSSNPIPLVSESASSGNYLSLRRLAVWLAEPMVKMRLMADLVDKCRVLHGGAMAGAIHLHAQHGDPLVHEFMRRLLQRVCSSLFEMVRRWVLEGELEDIFNEFFIVGQPVKAESLWREGYRLHDAMLPLFISPSLAQRILRTGKSINFLRVCCEDRGWADAATEAATDTGAAARRGGFGYGETDTLESLVDEASKRIDKHLLDVIFRRYKFKEHCLAIKRYLLLGQGDFVQYLMDIVGPELSEPANTISSFKLSGLLETAIRASNAQYDDPDILDRLRVKMMPHESGDRGWDVFSLEYDARVPLDTVFTESVMARYLRIFNFLWKLRRVEHALTGAWKTMKPNCITSNSFTRLQHAVKMQLVSTLRRCQVLWVEINHFISNLQYYIMFEVLEISWSNFLSEMEVAKDLDDLLAAHEKYLHSIVEKSLLGELSQSLYKSLFVIFDLILRFRSRADRLYEGIHELQARITESSQSSRDQNKSRKQVNDKSVEQGSWIAEGRKALTQRAGEFLRNMGQDLDAIAKEYSSLQEDFISQLPVQQHVDLKFLFFRLDFNEFYRRLCPSV* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1129 843 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 32 831 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Apr4g1129 843 Pfam Gamma tubulin complex component N-terminal 184 486 IPR041470 -
Apr4g1129 843 Pfam Gamma tubulin complex component C-terminal 493 836 IPR040457 GO:0043015
Apr4g1129 843 Coils Coil 790 810 - -
Apr4g1129 843 Coils Coil 261 281 - -
Apr4g1129 843 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 32 831 - -
Apr4g1129 843 Gene3D - 492 835 IPR042241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1129 Apr-Chr4 9620885 9624357 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1129 K16570 - gmx:100784710 1437.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1129 4 9620885 9624357 Apr4g1129 4 9620885 9624357 ECH