Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1124 ATGGCATCGAAACAAGGTGTGAAAACGAAGAGATTCGGGCTGAGTGGTTCAAAAGGTGCTAATTCGCCGTCATCCTCTACCACGTCGTCTTCTAAACAGTTTCAGGAAACGTCCGTTGATGGCCAGAGCTCGCCTGCATCTTCGTCGGCTCGAAGTAAGCCGCATCAATTTTATCCTGAAACTGCAGCTGCAGCTTTGGATACACAGAGGGCCAAAGAAAATGTCACGGTGACGGTCCGGTTTCGGCCTCTGAATCCAAGGGAAATTCGTCAAGGAGAGGAGATTGCTTGGTATGCAGATGGAGAAACTATTGTGCGAAATGAATATAACCCGTCCTTAGCGTATGCATACGACCGTGTCTTTGGTCCCACAACCACAACACGTCAGGTCTATGATGTTGCTGCTCAGCATGTCGTTAGTGGTGCTATGGAGGGCATCAATGGTACTGTATTTGCATATGGGGTAACAAGCAGTGGGAAGACTCATACAATGCATGGTGATCAACGATCTCCTGGAATCATACCTCTTGCTGTGAAGGATGCTTTTAGCATTATCCAAGAGACTCCAAACCGGGAGTTTCTCCTTCGAGTTTCCTACTTGGAGATCTACAATGAGGTGGTTAATGACTTACTCAATCCAGCAGGACAGAACTTAAGAATCAGAGAGGATGCTCAGGGCACCTATGTTGAGGGAGTAAAGGAAGAGGTTGTGCTCTCCCCTGCTCATGCACTGTCCCTTATTGCAGCTGGAGAAGAGCATAGACATGTTGGATCCACGAACTTCAACCTACTCAGCAGCAGGAGCCATACTATATTTACCCTGACTATAGAAAGTAGTCCATGTGGTGAGAATAGTGAAGGAGAAGCAGTGACACTGTCGCAACTGAATCTCATCGATCTAGCAGGCTCTGAGAGCTCAAAAGCTGAAACAACTGGCATGAGAAGGAGAGAAGGATCTTATATCAATAAAAGTCTTCTAACTCTTGGAACTGTTATTTCAAAGTTGACTGAAGATAAAGCTAGTCACATACCTTATAGGGATTCCAAATTGACTAGAGTACTTCAGTCTTCACTCAGTGGACATGGACGTGTTTCTCTTATCTGCACAGTAACTCCTTCATCAAGTAGTACCGAAGAGACTCATAATACATTGAAGTTTGCTCACCGAGCAAAGCACATTGAAATACGAGCAGCACAGAACAAGATAATTGATGAGAAATCACTTATCAAGAAATACCAACAAGAGATTCAATGCTTAAGGGAAGAATTGGAACAATTAAAGAGGGGTATTGTGACAGTTCAACCAAAAGATACTGGGGATGATGACATTGAGCTCCTAAAACAGAAGTTAGAAGACGGTCAAGTTAAGTTGCAATCCAGATTGGAACAAGAAGAAGAAGCTAAAGCTGCTTTGTTGGGCAGAATTCAGCGGTTGACTAAGTTGATTTTGGTCTCCACAAACGCATCACAGTCAACAAGATTTCCTAACAGACCTGGTCCTCGACGAAGACATTCCTTCGGGGAAGAAGAACTGGCGTACCTTCCTCATAAAAGGCGAGATTTAATCTTAGATGAGGAAAATATTGATTTGTATGTTAATGTGGAGGGAAATGCTCCAACAGCTGATGATTCTTTTAAGGATGAGAAAAAGACAAAGAAACATGGACTACTGAATTGGTTGAAGTTACGTAAACGAGATAGTGCCTTGACAGGCGCTAGTGATAAATCCAGTGGAGCAAAATCTACGAGCACACCTTCTACACCTCAGGCAGAAAGTGGTAATCATGTGGAGTCCAGACTCTCTCATTCTCAACCTGCAGAAAGCTCTCCCTCTGCTGATCTTGTATCAGAGGCAAGAGAGGATAAATATCTTCACGAGGACAGTTTATTGGGACAAGAGACTCCTTTGACAAGTATGAAGTCAGTTGATCAGATTGATCTTCTGAGGGAGCAGCACAAGATTTTATCTGGAGAAGTGGCACTTCATTCAAGTGCTTTGAAGAGGCTGTCTGAGGAAGCAACAGGAAATCCTCAGAATGCTCAGATTCATGTGGAGATGAAAAGGTTGAAAGATGAAATTAAGGTGAAGAGTGAACAAATAGATTTTCTGGAAAAGCAAATTTCAAATTCTTTTATCGCTTCAGATAAGACAGAACAGTCAGGAGTATCACAGACTGTTTCTGAGCTGATGGCACAATTAAATGAGAAATCCTTTGACCTTGAGGTCAAAGCAGCAGACAACCGAATAATTCAAGAACAGCTTAGTCAGAAGATTCGTGAATGTGAAAACCAGCAAGAAACAATTTCCTCTCTGAAACAGCAACTTGCAGATGCATTAGAATTGATAAACTTAAGCCCTGTAGTCAATCGTTCACATTTCTCTGTAACTAAAGACTACCATGGTGAACCTCATCTTGACAAGGGGAATGTTACAATAAACAATACCAATGAAGGGATTCATTTGCAAGCACAGGTAAGTGAGATAGAAGAGCTGAAGCAGAGGGTGGCAGAACTGACAGAATCAAAGGAACAGCTAGAATTTAGAAATCAGAAACTGGCAGAAGAGAGTTCATATGCTAAAGGGCTAGCTTCAGCTGCTGCTGTTGAGCTTAAGGCACTGTCAGAAGAAGTTGCCAAACTCATGAATCAGAATGAGAGACTGACTTCTGAGCTAGCAGCATCCAAGAATTCACCCACTCAACGTAGAACTAGTGGCACAGTCCAAAATGGGCGAAGAGAAAGTCATGTTAGACTTAGACGAAATGATCAGGGTGGATCAAATGCTGATATCAAGAGAGAATTAGCCTTAATCAAAGAACGGGAACTTTCGTATGAATCTGCCCTTTTAGAGAGAGATCAGAAAGAGGCCGAGCTTCAAAGAAAGATTGAGGAGTCAAAGCAAAGAGAAGCATACCTGGAAAATGAACTTGCTAACATGTGGGTCCTAGTGGCAAAGCTAAAAAAGTCACACGGAGCTGAAATTGATGTTTCAGGGTCGACTAAAGAGAGTTTGCAGTTGGATGGTTTTGGCATTTGA 3036 0.4272 MASKQGVKTKRFGLSGSKGANSPSSSTTSSSKQFQETSVDGQSSPASSSARSKPHQFYPETAAAALDTQRAKENVTVTVRFRPLNPREIRQGEEIAWYADGETIVRNEYNPSLAYAYDRVFGPTTTTRQVYDVAAQHVVSGAMEGINGTVFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFSIIQETPNREFLLRVSYLEIYNEVVNDLLNPAGQNLRIREDAQGTYVEGVKEEVVLSPAHALSLIAAGEEHRHVGSTNFNLLSSRSHTIFTLTIESSPCGENSEGEAVTLSQLNLIDLAGSESSKAETTGMRRREGSYINKSLLTLGTVISKLTEDKASHIPYRDSKLTRVLQSSLSGHGRVSLICTVTPSSSSTEETHNTLKFAHRAKHIEIRAAQNKIIDEKSLIKKYQQEIQCLREELEQLKRGIVTVQPKDTGDDDIELLKQKLEDGQVKLQSRLEQEEEAKAALLGRIQRLTKLILVSTNASQSTRFPNRPGPRRRHSFGEEELAYLPHKRRDLILDEENIDLYVNVEGNAPTADDSFKDEKKTKKHGLLNWLKLRKRDSALTGASDKSSGAKSTSTPSTPQAESGNHVESRLSHSQPAESSPSADLVSEAREDKYLHEDSLLGQETPLTSMKSVDQIDLLREQHKILSGEVALHSSALKRLSEEATGNPQNAQIHVEMKRLKDEIKVKSEQIDFLEKQISNSFIASDKTEQSGVSQTVSELMAQLNEKSFDLEVKAADNRIIQEQLSQKIRECENQQETISSLKQQLADALELINLSPVVNRSHFSVTKDYHGEPHLDKGNVTINNTNEGIHLQAQVSEIEELKQRVAELTESKEQLEFRNQKLAEESSYAKGLASAAAVELKALSEEVAKLMNQNERLTSELAASKNSPTQRRTSGTVQNGRRESHVRLRRNDQGGSNADIKRELALIKERELSYESALLERDQKEAELQRKIEESKQREAYLENELANMWVLVAKLKKSHGAEIDVSGSTKESLQLDGFGI* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1124 1011 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 428 IPR027417 -
Apr4g1124 1011 ProSiteProfiles Kinesin motor domain profile. 74 393 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g1124 1011 Coils Coil 944 975 - -
Apr4g1124 1011 MobiDBLite consensus disorder prediction 15 55 - -
Apr4g1124 1011 MobiDBLite consensus disorder prediction 1 57 - -
Apr4g1124 1011 Gene3D Kinesin motor domain 64 424 IPR036961 -
Apr4g1124 1011 Coils Coil 747 781 - -
Apr4g1124 1011 Coils Coil 679 706 - -
Apr4g1124 1011 MobiDBLite consensus disorder prediction 571 611 - -
Apr4g1124 1011 CDD KISc_CENP_E 74 393 - -
Apr4g1124 1011 ProSitePatterns Kinesin motor domain signature. 293 304 IPR019821 GO:0003777|GO:0005524|GO:0007018
Apr4g1124 1011 MobiDBLite consensus disorder prediction 489 508 - -
Apr4g1124 1011 MobiDBLite consensus disorder prediction 888 915 - -
Apr4g1124 1011 Coils Coil 395 429 - -
Apr4g1124 1011 SMART kinesin_4 72 401 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g1124 1011 Pfam Kinesin motor domain 80 393 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g1124 1011 PRINTS Kinesin heavy chain signature 145 166 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g1124 1011 PRINTS Kinesin heavy chain signature 259 276 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g1124 1011 PRINTS Kinesin heavy chain signature 294 312 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g1124 1011 PRINTS Kinesin heavy chain signature 343 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g1124 1011 Coils Coil 447 481 - -
Apr4g1124 1011 Coils Coil 821 855 - -
Apr4g1124 1011 MobiDBLite consensus disorder prediction 568 615 - -
Apr4g1124 1011 Coils Coil 863 897 - -
Apr4g1124 1011 PANTHER KINESIN-LIKE PROTEIN KIN-7K, CHLOROPLASTIC ISOFORM X1 49 1003 - -
Apr4g1124 1011 MobiDBLite consensus disorder prediction 888 911 - -
Apr4g1124 1011 PANTHER CENTROMERE PROTEIN E 49 1003 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1124 Apr-Chr4 9536426 9555769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1124 1 725 Miscellaneous Gene Families AT5G06670 69.589 0.0 942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1124 K11498 - gmx:100815027 1744.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1124 4 9536426 9555769 Apr4g1124 4 9536426 9555769 ECH