Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1106 ATGATGACAGACGAGGAACTGATACAGAAGCTTCAAGACTTAACCAACAACGCCCAACATCACCAGTTGGACACTCTCCGTTCAATCCTTCTTCACAATGGCACTGTACACTATCTACAATCCAAAGGGAACCATCTTCTTCCTCTCGATCCTGCCACTTACACACGTGTCATTCCATTGTCTTCCTACCAAGACTATGTTGAGTGTATCAACCAGATGGCCGATGGCAAAGACGACCCTTTTCTCTCTGTTGATCCTCTCCTCTGCTTCTTCTACAGCTCTGGAACAAGCTCGAGCTCCATGAAACCTAAATTGATCCCTTACTTTGATTCAACCCTTTCCAAAGCTGCCTCCTTTATTGCTCACCGAGGCAGTGTTGCTGTTCTTCAAAGGCTATTTCCTCCAAGGCCTGAAGTCAACAAGATCCTATATTTTCTTTATGCTGACAATATTACTACTACTAAATGTGGCTTGAAGGTCATGGCTGCTTCTACATACCCTTTACAAAGTGGTAAGGCGACCCCTCAACAACTTGCTGCGCTTTCCAGTCCCCCAGAAGTGATTCTTGGATCTCATGTTGAGCATCAAATGTACTGTCACCTTCTCTGTGGCCTTAGGAATCGTGACTATATAGATGGAATTACAACCCCTTATTCCATAGGTTTGATCAAAGCATTTGGTCTTCTGAAGTCCAAGTGGGAGCAGCTGTGTGATGATCTTGAACGTGGGTTTCCGAGTGACGAAATCTCAGAGGTGCCAATGAGGGAAGCTGTAACTAAGTTACTTGGTGGACCTCATCCAGAATTGGCAGATCATATAAGATTAATCTGCGAAGGTGAGAACTGGGGTGGAATTGTGTATAGATTGTGGCCAAATATCCGTTATATAAAGTGTGTTACCACTGGAAGCATGAAGCAGTACTACCAAAAGCTCAAGCATTATGCAGGAGAGGTACCTATTTTAGGAGGAGATTACTTTGCTTCAGAGTGCTGTGTGGGTATAAATTTAGACATAATGCAACCCCCCGAGACAACACAATTTGTGATACTTCCAAATGCTGCTTATTTTGAGTTTCTTCCATTTAGCATGGATGAGGACAATGATGTTAGCAAAGAAACAGTGGACCTCAGCGCTGTAGAGGTTGGGAAGATGTATGAAGTGGTTGTTACAACTTATAGAGGATTTTATCGCTACCGTTTGGGTGATATAGTGAGAGTTGTTGGTTTCTATAATTCATCTCCACTTGTGGAATATGTGATGAGAGCACCTAAAACTCCGGCTGAGATTCTGACAGAGAGAGACTTAATTTCAGCAGTTGAAAATTTTCAACGTGCACTTAGTGGTGCTATGAGAATTGAGATTGTTGAGTTTGCAAGTTTCTTGGACCAGGAGTCAAGGCCAAAGCAGTTGAAGGTATTTATAGAAGTCCAAGAGGAATCTAGTTTTCTGGAGGATAAACTGGAGGAATCAGTTATAACTTTTAGAAATTGTATTTCATCTCTCGAGACTGGTTTGGGAGCTTTGTACAAGGTGCAGAGGGGTAAAGGTGAGCTGGGGAAGTTACTAATATTCATCCTAAGGCATGGAGCTTTTGATCAGTTATTAGCTTTAGCCATCAAGAATGGAGCATCAGCTAGTCAATATAAACCCCCCAAGATTATTCGGAATCAGGAAGTTGTCAAACTCCTGGAAAAATTAGCTTTTGTAACAGTATCATTGGATAGTTAA 1728 0.4219 MMTDEELIQKLQDLTNNAQHHQLDTLRSILLHNGTVHYLQSKGNHLLPLDPATYTRVIPLSSYQDYVECINQMADGKDDPFLSVDPLLCFFYSSGTSSSSMKPKLIPYFDSTLSKAASFIAHRGSVAVLQRLFPPRPEVNKILYFLYADNITTTKCGLKVMAASTYPLQSGKATPQQLAALSSPPEVILGSHVEHQMYCHLLCGLRNRDYIDGITTPYSIGLIKAFGLLKSKWEQLCDDLERGFPSDEISEVPMREAVTKLLGGPHPELADHIRLICEGENWGGIVYRLWPNIRYIKCVTTGSMKQYYQKLKHYAGEVPILGGDYFASECCVGINLDIMQPPETTQFVILPNAAYFEFLPFSMDEDNDVSKETVDLSAVEVGKMYEVVVTTYRGFYRYRLGDIVRVVGFYNSSPLVEYVMRAPKTPAEILTERDLISAVENFQRALSGAMRIEIVEFASFLDQESRPKQLKVFIEVQEESSFLEDKLEESVITFRNCISSLETGLGALYKVQRGKGELGKLLIFILRHGAFDQLLALAIKNGASASQYKPPKIIRNQEVVKLLEKLAFVTVSLDS* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1106 575 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 2 571 IPR004993 -
Apr4g1106 575 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.6-RELATED 2 571 - -
Apr4g1106 575 Pfam GH3 auxin-responsive promoter 11 557 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1106 Apr-Chr4 9335482 9337534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1106 8 570 EF-hand Containing Proteins AT1G23160 32.812 4.68e-96 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1106 K14487 - gmx:100786829 957.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1106 4 9335482 9337534 Apr4g1106 4 9335482 9337534 ECH