Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1097 ATGGATAAGAAGATGGTTGTTGGAGAATCCACAACAACCTCATCGTTACCATCAACCTCGATCGTGAAGGGTTCTCAACAGTTCAAGATTACGAGGTACTCTTTGCTGAATGGAATTGGGAGTGGGAAATACCTTGCATCCGACACGCTTTCAGTGGGTGGCCATGATTGGGCTATCTATTGTTACCCTGACGGCCAAAACGATGACGACAACGCTGCCTACGTGTCACTCTTCATCGTATTGGTCAGCGAAGCTAGCAAGGATGTCACAGCCCTTTTCGAGTTGGCACTTTTGGATCAGTCAGGAAATGAGAAGCATAAGCTCCATAGCCAGTTTCAGACCATCCCTCAAAGCGGCCCTTACACGTTGAAATGCTGTGGCAGCAAGTGGGGATTCAAGAGGTTTATCAAGAAAACAGATTTAGAGGCATCGAAATTCCTTAAAGATGATTGCCTCTATGTGAATTGTAGAGTTGGGGTTGTGAGTAATTGCAGGGAGGGCCTTGATTAA 510 0.4608 MDKKMVVGESTTTSSLPSTSIVKGSQQFKITRYSLLNGIGSGKYLASDTLSVGGHDWAIYCYPDGQNDDDNAAYVSLFIVLVSEASKDVTALFELALLDQSGNEKHKLHSQFQTIPQSGPYTLKCCGSKWGFKRFIKKTDLEASKFLKDDCLYVNCRVGVVSNCREGLD* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1097 169 SMART math_3 28 141 IPR002083 GO:0005515
Apr4g1097 169 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 2-LIKE 9 167 - -
Apr4g1097 169 ProSiteProfiles MATH/TRAF domain profile. 23 158 IPR002083 GO:0005515
Apr4g1097 169 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 22 162 IPR008974 GO:0005515
Apr4g1097 169 SUPERFAMILY TRAF domain-like 21 163 - -
Apr4g1097 169 CDD MATH 24 158 IPR002083 GO:0005515
Apr4g1097 169 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 9 167 IPR045005 GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1097 Apr-Chr4 9272646 9274452 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1097 K10523 - aprc:113863843 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1097 4 9272646 9274452 Apr4g1097 4 9272646 9274452 ECH
Apr4g1097 4 9272646 9274452 Apr8g0204 8 1649215 1652897 PCT