Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1089 ATGTTGTCTCCGACTCTGAACACCCTCAGTCATGGTGGGAACGAGTTCCAACAAGGAAGCTTCGTGTACGATGCTGAGGATATTCCGTTTGGTACGCTGTGGTGGTTCGTTTATGCCGGAATCTCTTGCTTGCTTGTGCTCTTCGCTGGAATCATGTCTGGTCTCACTCTTGGTTTGATGTCTCTGGGACTCGTTGACCTTGAGATTCTTCAGCGTAGTGGATCTTCCACTGAGAAAAAACAAGCTGCTGCTATTTTGCCAGTTGTTCAGAAACAGCATCAGTTGCTTGTTACCTTGCTTCTTTGTAACGCTTGTGCCATGGAGGCACTTCCAATTTACCTTGATAAAATTTTTCATCCTATTGTAGCAGTATTGTTATCTGTGACTTTTGTTCTAGCTTTTGGAGAGGTTATCCCACAAGCTATATGCGCACGATATGGGCTCTATGTTGGTGCTAATTTTGTGGGGCTTGTACGTGTCCTAATGATTATCTGTTATCCAATTGCTTACCCTATTGGAAAGGTTCTAGATGTTTTGCTTGGACACAATCATGCACTGTTTAGGCGAGCACAGTTGAAAGCCCTTGTATCAATCCATAGTCAAGAGGCTGGTAAAGGAGGTGAACTCACTCATGATGAGGCAACAATTATCAGTGGAGCACTGGATCTCACTGAGAAGACAGCAGAGGAGGCTATGACACCAATTGAATCTACGTTTTCGTTGGATGTTGCTTCCAAATTGGACTGGGAAGCAATTGGGAAAATTCTTGCTCGAGGTCATAGTCGTGTCCCTGTATACAGTGGAAACCCCAAAAACATAATTGGCCTCTTACTAGTAAAAAATCTTCTTACTGTAAGAGCTGAAACAGAGACACCAGTTAGTGCAGTTTCCATCCGGAGGATTCCAAGGGTTCCAGCAGATATGCCTCTATATGACATTCTCAATGAGTTTCAAAAAGGAAGCAGCCATATGGCAGCTGTAGTCAAGGTTACAAGACCTCATGCAACTGGTGATATTGAAAAATCCAAGGATAAAGAAGTCATCAAACATAGTTCTCAACTAACTATGCCATTGCTAACCAAGACTTCTGAGAAAACAAAAAATGTTGTTGTCAATATTGACAAGCCTCATAAGCATGCTGCAGACCAACAGTTTCAAAAAGATGGCATTGCAACAAATGGTGTCCACCACTTTTCAGATAATGCTGAAGATGGGGAAGTTATTGGCATCATAACCCTGGAGGACGTTTTTGAAGAACTTCTGCAGGAAGAAATTGTGGATGAGACTGATGTGTATATAGATGTACATAGAAGAATACGTGTGGCTGCTGTTGCAGCTGCTACATCTGTGGCACGAGTTCCATCTGCCCGAAAGTTGACAGGTCACAAGCCTGTAGTAAATTTGAATTAG 1410 0.4277 MLSPTLNTLSHGGNEFQQGSFVYDAEDIPFGTLWWFVYAGISCLLVLFAGIMSGLTLGLMSLGLVDLEILQRSGSSTEKKQAAAILPVVQKQHQLLVTLLLCNACAMEALPIYLDKIFHPIVAVLLSVTFVLAFGEVIPQAICARYGLYVGANFVGLVRVLMIICYPIAYPIGKVLDVLLGHNHALFRRAQLKALVSIHSQEAGKGGELTHDEATIISGALDLTEKTAEEAMTPIESTFSLDVASKLDWEAIGKILARGHSRVPVYSGNPKNIIGLLLVKNLLTVRAETETPVSAVSIRRIPRVPADMPLYDILNEFQKGSSHMAAVVKVTRPHATGDIEKSKDKEVIKHSSQLTMPLLTKTSEKTKNVVVNIDKPHKHAADQQFQKDGIATNGVHHFSDNAEDGEVIGIITLEDVFEELLQEEIVDETDVYIDVHRRIRVAAVAAATSVARVPSARKLTGHKPVVNLN* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1089 469 Gene3D - 213 355 IPR046342 -
Apr4g1089 469 PANTHER BNAC05G01850D PROTEIN 18 465 - -
Apr4g1089 469 SUPERFAMILY CBS-domain pair 217 422 IPR046342 -
Apr4g1089 469 ProSiteProfiles CNNM transmembrane domain profile. 31 213 IPR002550 -
Apr4g1089 469 Pfam Cyclin M transmembrane N-terminal domain 41 212 IPR002550 -
Apr4g1089 469 CDD CBS_pair_CorC_HlyC_assoc 227 328 IPR044751 -
Apr4g1089 469 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 18 465 IPR045095 GO:0010960
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1089 Apr-Chr4 9161303 9166940 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1089 K16302 - gmx:100777230 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1089 4 9161303 9166940 Apr4g1089 4 9161303 9166940 ECH