Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1081 ATGAGCAAGAGCGCAGCTCCGAAGGACTCAAACGACGCCGTTACCCACTTCGATTTTTTCAAGAAATTTAAGCGCTTTAGCCCTCTCGAGTCTTCTCTGGGCATCGTTGGCTTCTTCTTCGTTGCTGCTCTCTTCATTGGTTGCTTCTTCTACTTGGATTACGAAGGGTTGCGCTCTAGAGGCACCACTCTCCTTGGCTTGCATTTTTCTTCATCATCTTCGTCTTCTTCTTCTGTGTCTGCTTCTGCCTCTCCTGTCGTTGGGAATGTCCCGGTTCAGTTTCTGAGTCAAGATGGTGATAAATGTGATGTGTTTGATGGGAATTGGGTTTGGGATGAAGCATATCCCCTTTACCATTCCTCAAATTGTTCCTTCTTGGATCAAGGTTTTCGATGCTCTGAGAATGGGAGGCCTGATACCTTCTACACAAAGTGGCGATGGCAACCCAAAGGTTGCAACTTGCCCAGATTTGATGCAAATAAGATGTTGGAAAAGCTGCGGAACAAGCGGCTAGTTTTTGTTGGTGATTCGATTGGAAGGAACCAGTGGGAATCGCTCCTTTGTATGCTCTCTTCTGCAGTTGCAAACAAGACTAGTGTCTATGAGGTTAATGGGAGCCCAATTACAAAGCACACAGGCTTCTTGGCATTCAAGTTTGAAGATTTCAACTGCATCATTGAATACTACAGATCACCATATCTAGTAGTGCAAGGACGGCCTCCTCCTGGAGCACCTGAAGGGGTAAAAATGAGTTTAAGAGTGGATCATATAGACTGGACTTCTCATCGCTGGAGAGATGCAGATGTATTGGTTCTCAATGCTGGACATTGGTGGAATTACGAGAAAACTGTCAAAATGGGTTGTTACTTCCAAGTAGGAGAGGAAGTGAAGATGAACATGACTACAGAAGAGGCATTCAGAAAATCAGTAGAGACAGTAATTGATTGGATTGCCAGTGAAGTTAACATGAACAAAACTTATGTCCTTTTCCGAACTTATGCTCCTGTCCATTTCAGGGGTGGTAACTGGAATACTGGTGGTGGTTGTCACATGGAAACACTACCTGATTTAGGCTCCTTGCCAGCATTATCTGACATCCACTTCAGAACCATCTTTGATGTCTTGTCAGAACGCACGACTAAATCAGAAGTCTTGAATTTGGACCTGCTTAATATCACCCAAATGTCATTGCGCAGAAAAGATGGCCATGCATCTATTTACTATCTTGGACCAGATGGCGCAGCCCCTATGCAGCGGCAAGACTGTAGCCATTGGTGCCTACCTGGTGTTCCTGATTCATGGAATGAGATTCTTTATGCACTTCTTCTTAAACGGGAGGAGCTTTACGAGCGGAATACTACAGAAGTTTCTCAAGTTCCGCTATAA 1386 0.4459 MSKSAAPKDSNDAVTHFDFFKKFKRFSPLESSLGIVGFFFVAALFIGCFFYLDYEGLRSRGTTLLGLHFSSSSSSSSSVSASASPVVGNVPVQFLSQDGDKCDVFDGNWVWDEAYPLYHSSNCSFLDQGFRCSENGRPDTFYTKWRWQPKGCNLPRFDANKMLEKLRNKRLVFVGDSIGRNQWESLLCMLSSAVANKTSVYEVNGSPITKHTGFLAFKFEDFNCIIEYYRSPYLVVQGRPPPGAPEGVKMSLRVDHIDWTSHRWRDADVLVLNAGHWWNYEKTVKMGCYFQVGEEVKMNMTTEEAFRKSVETVIDWIASEVNMNKTYVLFRTYAPVHFRGGNWNTGGGCHMETLPDLGSLPALSDIHFRTIFDVLSERTTKSEVLNLDLLNITQMSLRRKDGHASIYYLGPDGAAPMQRQDCSHWCLPGVPDSWNEILYALLLKREELYERNTTEVSQVPL* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1081 461 Pfam PMR5 N terminal Domain 101 153 IPR025846 -
Apr4g1081 461 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 154 440 IPR026057 GO:0016740
Apr4g1081 461 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 22 449 IPR029962 GO:0016413
Apr4g1081 461 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 22 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1081 Apr-Chr4 9079624 9083556 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1081 - - gmx:100779356 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1081 4 9079624 9083556 Apr4g1081 4 9079624 9083556 ECH