Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1080 ATGGGCATTCCTACAAAATGTGTAGCAATTGCGATTGGTTTGTTGTGCCTTTGGAGTGTTGCTGACAGCGTTCCCAACACAAGCATCACCAACGTTCTCTGCAACAACGGGGTGTACACCTCTGGGGACCCTTTTGCTATTAGTTTAAGCTATGTTCTTGGAGACTTAGAGAGTGAAACTCCAGTCCAGAAAAATTATGACTACTACAACATTTCGCCTTATCCTAATGCCTTTGCCTATGGACATGCTACTTGCAACCTTAATCTGACATCCTCTGATTGCAAAACCTGTCTTGGTGCTGCTAAAACGGCTATGTTCAATGCATGTCAGACACCACGGATCGGGGCTCGTTCAGTGCTCCATGATTGTACAATCAGGTATGAGCAATACCCATTTGATGATTAG 405 0.4444 MGIPTKCVAIAIGLLCLWSVADSVPNTSITNVLCNNGVYTSGDPFAISLSYVLGDLESETPVQKNYDYYNISPYPNAFAYGHATCNLNLTSSDCKTCLGAAKTAMFNACQTPRIGARSVLHDCTIRYEQYPFDD* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1080 134 ProSiteProfiles Gnk2-homologous domain profile. 27 132 IPR002902 -
Apr4g1080 134 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 7 133 - -
Apr4g1080 134 Pfam Salt stress response/antifungal 34 130 IPR002902 -
Apr4g1080 134 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 7 133 - -
Apr4g1080 134 Gene3D - 26 132 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1080 Apr-Chr4 9078374 9078778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1080 80 132 Receptor kinase-like Gene Family AT4G23140 43.396 2.95e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1080 - - gmx:102664018 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1080 4 9078374 9078778 Apr4g1080 4 9078374 9078778 ECH