Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1079 ATGGAATCAAGTCATGTAATAGCCATTACAAATGGAGAAGAGAATATTGCTCATAAGAAGGAGAATAAAGCACTTAAATTTCCCATTCCACCCTTTATTTCTCATATTAGGAAAAATGAAGTCCATTGCTCCACTGTCTCCATTACTTCCAATCTCAGATACAAGCAAATGAAAAGTGATCAAGGAACTAGGAAGATGATCCACAGTGTCAAAGTGGGAATCTCCCTGGTTTTGGTTTCACTCATGTACCTTGTGAATCCTCTCTTTGAACAAGTTGGAGAAAATGCAATGTGGGCTATCATGACTGTAATAGTCATCTTTGAATTCTCTGCAGGTGCCACACTAGGAAAGGGCTTCAATCGTGGAATGGGAACTATTGTTGGAGGAGGATTGGGTTGCTTAGCAGCATTTTTCGCCCAAAGCACTGGAATTGGGAGGGTTGGTAACTCGATTATAATCGCTACTTCAGTATTTATCTTTGGATCACTTGCTACATATTTTAGACTGGTTCCAAGCATAAAGAAAAGATACGATTATGGGGTGATGATATTCATGCTTACTTTCAATCTAGTGGTGGTGTCTGGGGTGCGTGCTCATGTGAAAGTGTGGGAAATTGCCAGGGAGCGTCTTGTGACAATACTAATGGGTTTCATTGTGTGCATTTGTGTGAGTTTGTTCGTTTTTCCTTTGTGGGCCAGTGATGAACTTCATGATTCCATAGTCTCAAGATTCCAAGACCTTGCTAATACAATTGAAGCTTGTTTAGGGGAATGTACGAAATTAGTTGGCGAAAAGGAAGACCAATCCCTCAACGTTTGCAAGTCGGTGTTGAACTCCAAGTCAAAGGACGAATCATTGGCAAATTTCGCAAAATGGGAACCGTGGCATGGAAAATTTGGATTTTCATACCCTTGGGGAAGGTACTTAAAGATTGGTGAGGTTCTTCGAGAACTGGCTGCGTTTATTCTTGCAGTGGGATGTCTCCAAACAGCAAAAGAGCCCATGGCCTATTTGAGGCAATCACAATCGGTGCAATTAGACACGTGCGTAGCAATTGAGTCAAAGGTTGCTGGTATTCTTCGAGAACTTGGAGAGAGCATGAAGCAAATGAGGAAATGTGAAGCAAAGTACAACATTTCGGCCCAATTGAAAGCAGTGAGATCAGATCTAAACTCGATAATTTCTACGTCCAAAATAGCACAACTTGAAGATGGTCAAGTGTTAGCAATTGCAAGCTCTGTGTTCTTGCTCATGGAAGTGGTGAGGAAGGTTGAGGAATTGGTAAAAGAGGTGGAAGAACTTGCAGATGTCGCTGGTTTTTCCACCCACACTACTCCAATGTCTTCGTAG 1350 0.4178 MESSHVIAITNGEENIAHKKENKALKFPIPPFISHIRKNEVHCSTVSITSNLRYKQMKSDQGTRKMIHSVKVGISLVLVSLMYLVNPLFEQVGENAMWAIMTVIVIFEFSAGATLGKGFNRGMGTIVGGGLGCLAAFFAQSTGIGRVGNSIIIATSVFIFGSLATYFRLVPSIKKRYDYGVMIFMLTFNLVVVSGVRAHVKVWEIARERLVTILMGFIVCICVSLFVFPLWASDELHDSIVSRFQDLANTIEACLGECTKLVGEKEDQSLNVCKSVLNSKSKDESLANFAKWEPWHGKFGFSYPWGRYLKIGEVLRELAAFILAVGCLQTAKEPMAYLRQSQSVQLDTCVAIESKVAGILRELGESMKQMRKCEAKYNISAQLKAVRSDLNSIISTSKIAQLEDGQVLAIASSVFLLMEVVRKVEELVKEVEELADVAGFSTHTTPMSS* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1079 449 Coils Coil 417 437 - -
Apr4g1079 449 Pfam Aluminium activated malate transporter 61 435 IPR020966 GO:0015743
Apr4g1079 449 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 3 441 - -
Apr4g1079 449 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 3 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1079 Apr-Chr4 9074768 9077218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1079 61 396 Miscellaneous Gene Families AT5G46600 43.466 2.53e-93 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1079 - - gmx:100779890 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1079 4 9074768 9077218 Apr4g1079 4 9074768 9077218 ECH