Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1076 ATGGAAGCAACGCGATTCTCCTCCATTCACTTTCATCCACACAGCTTCCGGACGAAACCTAACGCAATTGGAGGAAGAAGACACGTTGAATACATTAATGGAATGGGAGCTAGGATTTCTCTTTTCACCATCCCCGCATACAGCACAAGGAATCTGAACCGGTCTTTATTTCCGAAGCTGAACCGGACTCTTTCTGTTAACTTCTCCGACCGGTTCCGAAGTAATTATACACCCATGGAGGCTCCGAAAAATGAGATTTCTAATGAAGAAGTTGTTCCGTCAAATCGTGGCGACGAAGGGGAAGCGATTGTTGCATCTGACAACTCTAGAATCCTACAATTCAAACCCAGAATGTACAAAAACAGGTTTCTGAACTTTGTGCGTTTTAGTTCTGTCATTAACGGTGCTGCTGAATCGTTTTTCAAGAGCGAGATTCGAAGGAGGTTGTTTGTGACTGCTGTGCTAATTGTAATTAGTCGTGTTGGTTATTTTATTCCTCTTCCGGGATTTGATAGAAGGTTGATACCACAAGACTACTTGAGCTTTGTCTCAGGTTCATCTGTTGATGAACTTGGTGACTTCACATCTGAGCTCAAGTTATCACTTTTTCAGCTTGGAATCAGTCCTCAGATAATAGCATCTATTATTATGCAGGTACTCTGTCATGTTGTCCCTTCTCTAGTAAAGCTGCGGAAAGAAGGTCTGGATGGGCATGAGAAGATTAAAAGTTACATATGGTGGATGTCACTTGGCTTTGCAATTTTGGAAGCTTTAATAGTTTCTTGTTACTCACTTCCATATTCAATTTATGCTGCCAGTTATAGGGTCAAGCATGTAATGGTGACAACGGTTTTGTTGGTTTGTGGTGCAATGACTATTACATGGATATGTGATACCATATCAGAATCTGGATTTGGTCAAGGTTCGTCTCTTATCATATGTGTGGGTATACTTACGGGTTATATGGAGACGTTGTACAAGATGCTTACCCAGCTTTCAGTGAGTACTGTGAGTTGGTGGCCATATGTCCTTGCTGTATTGGGCATATTCACCACAGTCACTATGTGGGCAGTTGTAGTCACTGAAGGTTGCAGGAAAGTAAAGCTTCAATACTATGGTTTTAAGCTTGCTTCTGCTGCAAGGGAACAATCACCAATTACTGAAGTGGAGCCCTATATTCCTTTCAATATTAATCCAGCAGGGATGCAACCTGTTCTTACCACCTCTTACCTCTTGGCATTTCCAAGCATTCTTGCAAGTCTGTTGAGGTCATCTTTTTGGGAGCATGTCAAGGAAGTATTGAACCCTGAAACTTCCGTTGGTGCTGAGCCATGGGTCTACTATTCCATATATGCTTTTTTTGTCTTCCTGTTCAATATATTTGATATTGCTAACATGCCAAAGGAAATTGCTGATTATTTAAATAAGATGGGTGCAAGAATACCAAACATAAAGCCTGGGAAGGCTACCATAGAATACCTCTCAAAGGTTCAGGCATCCACACGATTTTGGGGGGGACTGTTGTTAAGTGTTTTGGCCACTACATCAACTATTCTTGACCACTATTTACGGCGTGTCAATGCTGGATTTGCTATTGGTTTTACATCAGTGCTAATTATTGTCGGTTCCATTATTGAACTTAGAAGATCATATCAAGCATATAATGTGATGCCAAGCTTAAGCAATGCGTTGAGACGATATGGTGTATAG 1710 0.4123 MEATRFSSIHFHPHSFRTKPNAIGGRRHVEYINGMGARISLFTIPAYSTRNLNRSLFPKLNRTLSVNFSDRFRSNYTPMEAPKNEISNEEVVPSNRGDEGEAIVASDNSRILQFKPRMYKNRFLNFVRFSSVINGAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPQDYLSFVSGSSVDELGDFTSELKLSLFQLGISPQIIASIIMQVLCHVVPSLVKLRKEGLDGHEKIKSYIWWMSLGFAILEALIVSCYSLPYSIYAASYRVKHVMVTTVLLVCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLYKMLTQLSVSTVSWWPYVLAVLGIFTTVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSILASLLRSSFWEHVKEVLNPETSVGAEPWVYYSIYAFFVFLFNIFDIANMPKEIADYLNKMGARIPNIKPGKATIEYLSKVQASTRFWGGLLLSVLATTSTILDHYLRRVNAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1076 569 SUPERFAMILY Preprotein translocase SecY subunit 129 554 IPR023201 -
Apr4g1076 569 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 123 568 IPR002208 GO:0015031|GO:0016020
Apr4g1076 569 Gene3D SecY subunit domain 133 559 IPR023201 -
Apr4g1076 569 Pfam SecY 201 547 IPR002208 GO:0015031|GO:0016020
Apr4g1076 569 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC 123 568 - -
Apr4g1076 569 PRINTS Preprotein translocase SecY subunit signature 149 167 - -
Apr4g1076 569 PRINTS Preprotein translocase SecY subunit signature 200 220 - -
Apr4g1076 569 PRINTS Preprotein translocase SecY subunit signature 241 264 - -
Apr4g1076 569 PRINTS Preprotein translocase SecY subunit signature 276 301 - -
Apr4g1076 569 PRINTS Preprotein translocase SecY subunit signature 302 325 - -
Apr4g1076 569 PRINTS Preprotein translocase SecY subunit signature 400 419 - -
Apr4g1076 569 PRINTS Preprotein translocase SecY subunit signature 445 467 - -
Apr4g1076 569 PRINTS Preprotein translocase SecY subunit signature 533 551 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1076 43 569 Miscellaneous Gene Families AT2G31530 73.624 0.0 799
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1076 - - gmx:100803256 984.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1076 4 9034334 9042328 Apr4g1076 4 9034334 9042328 ECH