Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1064 ATGTGGGCACCCCAATCTGATGATAATATTCAACGTCGTGACAGAACAGGTGCCGCCACTTTTGCTGATTGGAGTGGCGGTGATTGGAAATTTGGAAGAATGGTAGCAACTAGCATGCCGGACCCAGAATTTCGGAAACAGAGGGAGTTCAGATGTGTTAGTGATGGTCGATATAGATTATCTGGTGGTGGCATAGATCTGCTTGTATCAGTAGAATTTATTCAAGTCATAACTTCAACATCTGACATGAAAAGTGGACTGAAAGATATATGTCGTGCAATATCACTATGTTGTGATATATGTAGTGTGAGGTATGTTGTACAATTGGATTTGCATCAGGTTTTACATCGTGTTGGGAGGTCGGCTGGTATATGCGCCTCATCACGGTGTTGGGGGGCATGTAGTGGTACACTATCAGGCAATTATGTTGACGAATTGCCATCCTCTATATGGCTTGAGACAGTAAAGGATGATGATATAAACGAGGAAGCTGCTCACCAGGTTTTGGTAACAAACGAGATTCGAAGGAAGATAAATGCTATCAAGTTAATGTTGGATTCCATGGAAGAAGGAGAGATAACCATATCAGCTTATGACACAGCATGGGTTGCTCTAGTAAAAAATGTTAATGATGAAAATTCACCTCAATTCCCATCCTGTCTTGAATGGATTGCCAATAATCAGCTACCCGATGGCTCCTGGGGAGACGTTGAATTATTTGAAGCCCATGACCGACTTATTAACACCTTGGCTTGTGTTGTTGCTTTAAGATCATGGAATATGCATCATGACAAGTGTGAGAAAGGAATTAAATTCTTCAAGGAAAATCTACACAAGCTTCAGGATGAGAATGTAGAGCATATGCCAATCGGGTTTGAAGTTGCTTTTCCTTCTCTCCTCGATTTAGCCGCAAGTTTGAATATTGAAGTGCCAGATGATTCTCCTATCCTGAAACACATTTTTGCAATGAGAGACATAAAGCTCAAAAAAATACCGAAAGAAGTGATGCACAAGGTGCCCACAACATTGCTCCATAGTTTGGAGGGAATGCCAAATTTGGACTGGAAACAACTTCTTCAGCTGCAGTCCCAAGACGGGTCATTCTTATTCTCTCCATCCTCCACAGCTTATGCTCTTATGATGACCAAAGATGAAAATGCTCTCAAATACCTGGAAAAAACAGTCAAGAGGTTCAATGGGGGAGTTCCAAATGTCTTCCCGGTGGATTTGTTTGAACACATATGGGTTGTTGATCGGCTAGATCGTCTTGGAATTTCAAGATACTTTCAATCAGAGATCATGGATTGTGTGAGTTATATTTCCAGATTTTGGACTGAGAAGGGTATTTGCTGGGCAAGGAATTCAAATGTTCAAGATATAGATGACACAGCAATGGGATTTAGACTGCTAAGGTTGAATGGTCACCAAGTTTCACCGAATGTGTTCGAGCATTTTAAGAAAAATGGTGAATTCTTCTGCTTCTCTGGGCAGTCAAACCAAGCTGTGACAGGGATGTTTAATCTTTTTAGAGCATCTCAAGTGCTATTTCAAGGAGAGAAGATTCTTGAGGATGCCAAGAATTTTTCAGCAAACTTTTTAACTGAGAAACGTGCTGCTAACGAGCTCCTAGATAAATGGATCATAACCAAAGACTTACCTGGCGAGGTTAGTTACGCGCTGGATGTGCCCTGGTATGCTAGCTTATCCCGATTGGAGACAAGATTTTTCCTTGAACAATATGGTGGCAACAATGATGTTTGGATTGGCAAGACCCTTTATAGGATGCCCCACGTGAACAGTGATCTTTATCTGGAGCTCGCAAAGTTGGATTACAGCAACTGTCAAGCAGTGCATTGTGCAGAATGGGAAAAAATCCAAAGGTGGTACTCGGAATCAGGACTAGAGGGGTTTGGATTGAGCAAAAGAAGTGTCCTATTTGCTTACTTTGTAGCAGCTGCAAGCATATTTGAGTCTGAGAGGTCTCGAGAGCGACTTGCATGGGCAAAAACACTAGCGTTGCTCGAGACACTGAGGTCCTTTATAAAGGATAAAGAAACTAGGACTGCATTTGTGGAGCGGTTTAACAGCAGCATTAACGGACCAAACCATTCAAACAAGCAATTGAACAAGAGAGAGGATGAACTCCTGGAGATTTTGCTGGCAAACCTTGATTACCTTGGGTTTGAGATGTTCAAGGCTCATGGTCAAGAAGTTTCTCATTTTTTGAATCAAACATGGCAAGGCTGGCTGTCAAGTTGGCAAAATGAAGGGAAAAGCACTCAAAGAGAAGCAGAACTGATTGTTGAAACCATAAATTTAATGGCTGGCTTTTGGTCAGAAGAACTTCAGCTCAATCCACAGTACCATAGGTTGCTGGAAGTTGCCAATAGAGTCTGCCATGGGCTCCGAAATTACCAAAACGACAAGGCACATGACAGTGGCAAAAGTAAGCTGAGTACAACCACTATCACTACCCCTGAAATAGAATCAGATATGCAAGAACTTGTGCAACTGCTGGTCCAAAATTCCTCAGATGGCGTGCACTCCAATATCAAAAATTCATTTCTTACAGTGACTAAGAGCTTCTACTATGCAGCATATTGTGACCCAGAGAACATCGACTCTCATATTGAGAAGGTTCTCTTTCAAAAAGTGATGTAA 2661 0.4179 MWAPQSDDNIQRRDRTGAATFADWSGGDWKFGRMVATSMPDPEFRKQREFRCVSDGRYRLSGGGIDLLVSVEFIQVITSTSDMKSGLKDICRAISLCCDICSVRYVVQLDLHQVLHRVGRSAGICASSRCWGACSGTLSGNYVDELPSSIWLETVKDDDINEEAAHQVLVTNEIRRKINAIKLMLDSMEEGEITISAYDTAWVALVKNVNDENSPQFPSCLEWIANNQLPDGSWGDVELFEAHDRLINTLACVVALRSWNMHHDKCEKGIKFFKENLHKLQDENVEHMPIGFEVAFPSLLDLAASLNIEVPDDSPILKHIFAMRDIKLKKIPKEVMHKVPTTLLHSLEGMPNLDWKQLLQLQSQDGSFLFSPSSTAYALMMTKDENALKYLEKTVKRFNGGVPNVFPVDLFEHIWVVDRLDRLGISRYFQSEIMDCVSYISRFWTEKGICWARNSNVQDIDDTAMGFRLLRLNGHQVSPNVFEHFKKNGEFFCFSGQSNQAVTGMFNLFRASQVLFQGEKILEDAKNFSANFLTEKRAANELLDKWIITKDLPGEVSYALDVPWYASLSRLETRFFLEQYGGNNDVWIGKTLYRMPHVNSDLYLELAKLDYSNCQAVHCAEWEKIQRWYSESGLEGFGLSKRSVLFAYFVAAASIFESERSRERLAWAKTLALLETLRSFIKDKETRTAFVERFNSSINGPNHSNKQLNKREDELLEILLANLDYLGFEMFKAHGQEVSHFLNQTWQGWLSSWQNEGKSTQREAELIVETINLMAGFWSEELQLNPQYHRLLEVANRVCHGLRNYQNDKAHDSGKSKLSTTTITTPEIESDMQELVQLLVQNSSDGVHSNIKNSFLTVTKSFYYAAYCDPENIDSHIEKVLFQKVM* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1064 886 Gene3D Farnesyl Diphosphate Synthase 614 886 IPR008949 -
Apr4g1064 886 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 365 585 IPR008930 -
Apr4g1064 886 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 197 276 IPR008930 -
Apr4g1064 886 Coils Coil 263 283 - -
Apr4g1064 886 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 158 883 - -
Apr4g1064 886 SFLD Terpene Cyclase Like 1 N-term 167 594 - -
Apr4g1064 886 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 167 594 - -
Apr4g1064 886 SUPERFAMILY Terpenoid synthases 601 861 IPR008949 -
Apr4g1064 886 Pfam Terpene synthase, N-terminal domain 354 560 IPR001906 GO:0010333|GO:0016829
Apr4g1064 886 Pfam Terpene synthase family, metal binding domain 604 759 IPR005630 GO:0000287|GO:0010333|GO:0016829
Apr4g1064 886 Gene3D - 180 611 IPR036965 GO:0010333|GO:0016829
Apr4g1064 886 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 158 883 - -
Apr4g1064 886 Gene3D - 197 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1064 Apr-Chr4 8880435 8902612 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1064 K04120 - gmx:100807519 1214.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1064 4 8880435 8902612 Apr4g1064 4 8880435 8902612 ECH