Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1062 ATGTCTTCCCACTTCTCCTCTTACTTCCACCTTCCCTCTTTCTCTTCTTCTAAGCATTTTCCTTCTCCATCTTCTTCTACCCCTCTTCTCTACTTCTCCAAATTCTCTCTGGGTGCTGTGTCGTCCGAGACTAAAGACAAACAAGAGATAAGATGCAGAGCTATATCCAAACCAAGAACTCAAGAATATCCAGAAGTATTTCAGGGTAGTCTAGCAACGTTAAAGTTGCGTGAGATTAATGTGGAAGATGACATAGATGAGGAGCGAGACATTGGGGTTTTGGTGGCGAATGAGATGGAGGAGCGAGTGGGCACTATCAAATCGATATTGGGTTCAATGGAAGATGGAGAGATTACCATATCTGCTTATGACACAGCTTGGGTTGCTCTGGTGGAAGATGTTAATGGAAGTGGTGCCCCTCAATTTCCGTCGAGTCTAGAATGGATAGCAAAAAATCAACTTGCGGATGGATCATGGGGTGATAAGGAATTATTTTCAGCCCATGATCGGATTATGAACACGTTGGCTTGTGTTATTGCATTAAAATCATGGAATATGCACCCCGAAAAGTGTGAGAAGGGAATGACATATTTTAAAGAGAACCTTGACAAGCTTCAGAATGAGAATGCGGAGCACATGCCAATTGGGTTTGAAGTTGCTTTTCCTTCACTTCTTGATATGGCTCGTGGTTTGAACATTGAAGTGCCAGATAATTCCCCTATTCTGAACAAAATCTTTGCAATGAGAAATGTAAAACTCACAAGAATACCAAGAGAGATGATGCATAAAGTGCCCACAAGTCTGCTCCATAGCTTGGAAGGGATGTCAGGCTTGGACTGGAAACAACTTATAAAACTGCAGTCTCAAGACGGGTCATTCTTGTTTTCTCCATCTTCCACCGCCTTTGCTCTCATGCAAACCAAAGACGAAAATTGTCTCAAATACTTGAATAAAGTGGTCAACAAGTTCAATGGGGGAGTTCCAAACGTGTATCCAGTGGATTTGTTCGAACATATTTGGGTGGTGGATCGGCTGGAGCGCCTCGGAATATCGCGGTTTTTTCAGCAAGAGATCAAAGACTGTTTGAGCTATGTTTATAGATATTGGACTGAAAAGGGTATTTGTTGGGCAAGAAATTCAAATGTTCGAGACATTGATGACACGGCAATGGGGTTCAGATTACTAAGATTACATGGCCTCCCAGTTTCAGCCGATGTGTTTAAGCACTTCGAGAGAAATGGTGAATTCTTCTGCTTTACGGGGCAGACCACGCAAGCGGTGACGGGAATGTTCAATTTGTATAGGGCTAGTCAAGTAATGTTTCCTGGGGAGAAAATTCTTGAACATGCAAAGCACTTTTCAGGGAAATTTTTAAGGGAGAAGCGAGTAGCAAATGAGCTAGTAGATAAATGGATCATAATGAAGAACCTGGGAGGAGAGGTAGCTTACGCTTTGGACGTGCCATGGTATGCAAGCTTACCTCGAGTGGAAACCAGATTCTACATTGACCAATACGGTGGCGAAAGTGACGTATGGATAGGCAAAACCCTTTATAGGATGGCCTACGTGAGCAACAATAATTATCTCGAGCTTGCTAAACTAGATTACAACATGTGCCAAGCACAGCATCTGGCAGAGTGGGGGAGAATTCAAAAATGGTATTCAGAATCTAGATTGGGAGAGTTTGGAATGAACAGAAGAACTCTTCTGTTGGCCTATTTTTTGGCAGCAGCCAGCATATTTGAGCCTGAAAAGTCTCATGTGAGACTTGCTTGGGCCAAAACCACAGCATTGATTGAGACAATCACATCCTATGTTAGTGATGCAGAAATGAGGAAAGCTTTGGTTAAAAAATTCAGTAACTGCATTAACAAGAGAGACTACTCCATTGGCTGGAGGTTGAGCAGGAATAAGAGAGGACATGGACTCGTTGAGACTTTGGTTGCAACCATAGATCAGATTTCATGGGATATACTTGTATCTCATGGTCATGAAATTGGATATGACATGCGTCGCTGTTGGAAAAAGTGGCTTTCAAGTTGGGAAGGCGAAGGGGACAAATGTGAAGGACAAGCAGAGCTTTTGGCGCATATAATAAATCTTAGTGCCGGACATTGGATTTCGGAGGAGCAGATGCTGAATCCACATTATCAGCATCTGCTTCAACTCACTAACACAATCTGCCATAGACTCCGTTGCTATCAAAAGGACAAGGAACACGAGAGCGGAAGCTGCAGTACGTACGTGAACAGCATCACCACCTCAGAAGGAGAGTCAAAAATGCAAGAACTGGTGCAATTGGTGCTCCAAAATTCTTCAAGTAGCGTTAATTTGAACATCAAAAATACTTTCCTCGCGGTGGCGAAGAGTTTTTACTATACAGCTTTCTGTGATTCAAGGACCATCAACTTCCATATTGCCAAAGTTCTCTTTGATAAAGTTGTTTGA 2448 0.4265 MSSHFSSYFHLPSFSSSKHFPSPSSSTPLLYFSKFSLGAVSSETKDKQEIRCRAISKPRTQEYPEVFQGSLATLKLREINVEDDIDEERDIGVLVANEMEERVGTIKSILGSMEDGEITISAYDTAWVALVEDVNGSGAPQFPSSLEWIAKNQLADGSWGDKELFSAHDRIMNTLACVIALKSWNMHPEKCEKGMTYFKENLDKLQNENAEHMPIGFEVAFPSLLDMARGLNIEVPDNSPILNKIFAMRNVKLTRIPREMMHKVPTSLLHSLEGMSGLDWKQLIKLQSQDGSFLFSPSSTAFALMQTKDENCLKYLNKVVNKFNGGVPNVYPVDLFEHIWVVDRLERLGISRFFQQEIKDCLSYVYRYWTEKGICWARNSNVRDIDDTAMGFRLLRLHGLPVSADVFKHFERNGEFFCFTGQTTQAVTGMFNLYRASQVMFPGEKILEHAKHFSGKFLREKRVANELVDKWIIMKNLGGEVAYALDVPWYASLPRVETRFYIDQYGGESDVWIGKTLYRMAYVSNNNYLELAKLDYNMCQAQHLAEWGRIQKWYSESRLGEFGMNRRTLLLAYFLAAASIFEPEKSHVRLAWAKTTALIETITSYVSDAEMRKALVKKFSNCINKRDYSIGWRLSRNKRGHGLVETLVATIDQISWDILVSHGHEIGYDMRRCWKKWLSSWEGEGDKCEGQAELLAHIINLSAGHWISEEQMLNPHYQHLLQLTNTICHRLRCYQKDKEHESGSCSTYVNSITTSEGESKMQELVQLVLQNSSSSVNLNIKNTFLAVAKSFYYTAFCDSRTINFHIAKVLFDKVV* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1062 815 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 83 811 - -
Apr4g1062 815 Gene3D - 122 334 - -
Apr4g1062 815 Pfam Terpene synthase, N-terminal domain 279 485 IPR001906 GO:0010333|GO:0016829
Apr4g1062 815 Gene3D Farnesyl Diphosphate Synthase 539 815 IPR008949 -
Apr4g1062 815 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 96 519 - -
Apr4g1062 815 Pfam Terpene synthase family, metal binding domain 529 684 IPR005630 GO:0000287|GO:0010333|GO:0016829
Apr4g1062 815 SFLD Terpene Cyclase Like 1 N-term 96 519 - -
Apr4g1062 815 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 83 811 - -
Apr4g1062 815 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 290 510 IPR008930 -
Apr4g1062 815 Gene3D - 105 537 IPR036965 GO:0010333|GO:0016829
Apr4g1062 815 SUPERFAMILY Terpenoid synthases 525 798 IPR008949 -
Apr4g1062 815 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 122 305 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1062 Apr-Chr4 8847376 8854941 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1062 K04120 - gmx:100784193 1405.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1062 4 8847376 8854941 Apr4g1062 4 8847376 8854941 ECH