Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1059 ATGGATACCTTTCTACTCCACACTGCGTCATCAACATCAATGGCGAAACGACCATGTCCCTCGCAAAACCCTAGGGTTCAGATCCTTAACGAGGTGGAGCGTCTCCTCGACGCGTTCCTCTCCCTCTCCGACCTCCCTTCTTCCTCCCTCGATCTCTCCTTCGAGAGGCTTCTCCAATCTGTCCCCTCCGACTCCGATCTCATCGATCGCGCCCTCAAAATGGGTTCTCTCCTTCTCGACGCCGCCAAACACTCCTCTCGAAAACGTGCTTCCCTCCACAATTCTCTTGCCTGGCCTCTCCCTCCCGACCTCACCATCAAGGTGTTCTCCATGCTTGATACCCAGAGCCTGTGCTATGCGTCAGCTACTTGTTCGTTGTTTAGCAAATGTGCTAAAGATCCTCTGTGCTATGAAAATCTTGATTTGACAACACTTGTTCCCAAGGTTAACAATGCAGTAGTTGCCACAATGATTCAGCGGGCTGGAAAGGCACTACGGTCTCTTAAGCTTGGTGTTGTCCCTGGTGCTGCTACTCCTCCTGGATCTTGTCAACCGTATGTTTGTACCATCAGAAATGCTATTGTCGAAGTATCCAACTTTTCATGGAATGATAAGAGATCTCGACAAGGGAGAGAGTCATCGATTCTTACAAGATGCTGTTTAAGCCCTTTAAGTGGGGATGGTGGTGTCCCAGGGAAGCTTTTGAGAAAGTTGCACTTGTACAATATAGAGAGAATGGATAATGCATCCCTTAGTGGGGCATTGTCGGCATGCCCTTCTCTCCTTGATCTGGAAATTGTTGGGCTCCATGTTGAACTGAGGCAAACATTAGTGTCAGTAAGTGCAAACTGTCGCATGATTGATCGTTTGTTTTTTGAGTCTTCTAAAACAGGTAGAGATGACAGCTTGAAAGCACAAACCTGTTCTGAGCTAGTAAGCAATTGTCCTCATCTAACTTCTTTATCCCTTAGAGGGTTTAAGCTACACGATTGTAAAGTCCGCATATTGGTTAAGGGATTTCGGAAACTCAAGTATGTTGACTTTTCAACATCCTATTCAATCACTGGAAATTTCTTAAGAAACCTTGGTAGCTGCAATGGTGGGAATTTACTGGAGGTCTTAATTTTAAGGGATTGCATGCATCTCAAAGAGATGGAAGTTGCTAAGTTGTTGACAGCAATTCTTACAGGAGATTTCAAATCGCTTGTACATCTTGACATATCCAACAGGGAAGGCTTAGCATCTGAGGCTGACTGGTATCACAGATGCTACAACTCTAGTATTATGCCTATCAAGCAGGTTTTGGAATCAAGGCCTGATATGCGTTTGGTGGCTGAATATCCATCAGAAGGAAGTTACATTGAGACATTCGATGCTGATATGAATAGTGAAATAAGTTTGCCATCGCAATCCAGCGGCCACACATCACTTTTTATGAGTACATCTGAAAGCAGCTACAACAGTGATCAGGGCAGTGGGAATGAAGATAGTCAAGATGCCAACTATGTGATTTATGAGGAAAGCTCAGATGAGATTGACTATCTGGTCCTGTAG 1554 0.4498 MDTFLLHTASSTSMAKRPCPSQNPRVQILNEVERLLDAFLSLSDLPSSSLDLSFERLLQSVPSDSDLIDRALKMGSLLLDAAKHSSRKRASLHNSLAWPLPPDLTIKVFSMLDTQSLCYASATCSLFSKCAKDPLCYENLDLTTLVPKVNNAVVATMIQRAGKALRSLKLGVVPGAATPPGSCQPYVCTIRNAIVEVSNFSWNDKRSRQGRESSILTRCCLSPLSGDGGVPGKLLRKLHLYNIERMDNASLSGALSACPSLLDLEIVGLHVELRQTLVSVSANCRMIDRLFFESSKTGRDDSLKAQTCSELVSNCPHLTSLSLRGFKLHDCKVRILVKGFRKLKYVDFSTSYSITGNFLRNLGSCNGGNLLEVLILRDCMHLKEMEVAKLLTAILTGDFKSLVHLDISNREGLASEADWYHRCYNSSIMPIKQVLESRPDMRLVAEYPSEGSYIETFDADMNSEISLPSQSSGHTSLFMSTSESSYNSDQGSGNEDSQDANYVIYEESSDEIDYLVL* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1059 517 MobiDBLite consensus disorder prediction 465 500 - -
Apr4g1059 517 Pfam F-box-like 100 142 IPR001810 GO:0005515
Apr4g1059 517 Gene3D Ribonuclease Inhibitor 95 427 IPR032675 -
Apr4g1059 517 PANTHER F-BOX SKIP17-LIKE PROTEIN 31 463 - -
Apr4g1059 517 SUPERFAMILY RNI-like 232 415 - -
Apr4g1059 517 SUPERFAMILY F-box domain 96 145 IPR036047 GO:0005515
Apr4g1059 517 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 31 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1059 Apr-Chr4 8786809 8792927 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1059 K10268 - gmx:100786317 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1059 4 8786809 8792927 Apr4g1059 4 8786809 8792927 ECH