Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1057 ATGAAGGAGTTTCCTTCTTGTTTTGGAGAGAATGGTGTTCAGGTTGTGGATTCCTCCTCTTCAAGTGCCACAAGAGGAGCACAAAATGCGGTTACTTGTGTGTATCATTGTAAGTTAAGAGCTCGTTCATGCTTGATCACGGTCTCGTGGACCAAAAGTCTGATGGGTCAAGGCTTAAGTGTGGGAATTGATGAATTGGGCAACCATTGCCTCTGCAAAGTTGATATAAAGCCATGGTTGTTCTCAAGAAGAAAAGGGTCTAAGAATTTGGAGGTTGAATCTAATAAAATTGATATACTTTGGGACTTGAGTTGTGCTAAATTTGGTTCGGGGCCAGAACCATTGGAGGGGTTTTATTTAGCTGTTGTGTTCAACCAAGAGATGGTATTGCTCCTAGGGGATCTGAAAAAGGAGGCATGCAAGAAAATTGCTAGTGACTATGCTTATGCTCACTCTGATGCCATTTTTATTGCAAAGAGAGAACACATTTTTGGTAAGAAGTTTTACGGTGCAAAGGCTCAATTTTGTGACAAGGGGCAAGTGCATGATGTTAGAATTGAGTGTGACACACTTGGGCTCAATGATCTGTGTCTAGTGATTAGAATTGATAGCAAGACAGTAATGCAGGTGAAGCAACTCAAGTGGAAGTTCCGGGGCAATCACACCATTTTGGTGGATGGGCTGCCGGTGGAAGTATTCTGGGACGTACATAATTGGCTCTTTGGAAATGCTATGGGAAATGCAGTTTTTATGTTCCAAACCTGCATTTCAACTGAGAAGCTGTGGGCATGCCAATCTGTTTCAGATCCTTCTGTTCTTACATGGGCTTATTCTCAGCAGTTCACAGATTCCCAGTTGCAAGGTCTTGGATTCTCTCTCATTTTGTATGCTTGGAAAAATGAGTAG 906 0.4227 MKEFPSCFGENGVQVVDSSSSSATRGAQNAVTCVYHCKLRARSCLITVSWTKSLMGQGLSVGIDELGNHCLCKVDIKPWLFSRRKGSKNLEVESNKIDILWDLSCAKFGSGPEPLEGFYLAVVFNQEMVLLLGDLKKEACKKIASDYAYAHSDAIFIAKREHIFGKKFYGAKAQFCDKGQVHDVRIECDTLGLNDLCLVIRIDSKTVMQVKQLKWKFRGNHTILVDGLPVEVFWDVHNWLFGNAMGNAVFMFQTCISTEKLWACQSVSDPSVLTWAYSQQFTDSQLQGLGFSLILYAWKNE* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1057 301 PANTHER EXPRESSED PROTEIN 1 300 IPR008586 -
Apr4g1057 301 PANTHER PLANT/T24G3-80 PROTEIN 1 300 - -
Apr4g1057 301 Pfam Plant protein of unknown function (DUF868) 27 299 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1057 Apr-Chr4 8781322 8782227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1057 1 301 EF-hand Containing Proteins AT3G04860 58.689 7.08e-123 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1057 - - gmx:100786850 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1057 4 8781322 8782227 Apr4g1057 4 8781322 8782227 ECH
Apr4g1057 4 8781322 8782227 Apr8g0238 8 1869561 1870698 PCT