Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1049 ATGGAGCAGTTCATGAGTGCTTTTCAAATAAGAATGATGCTAGCAACCCTTATAGTCAGTTCAGTAAATTTGGTTGATGGGCAGGTTAGTACCCCTTGCACAACCTCAATGATGAGCAGTTTCACACCATGCGCCAACATCATTACAGGAAGCACCAATAAAGTTTCAATGCCATCAACTACGTGTTGTGATTCATTAAGGTCTTTGATGAGCACTAACATGGATTGTGCTTGCATGGTAATATCAGCCAATGCTCCGTTTTTCCAACAACCCATTAGCCAAGCTCTTACCCTCTCCCTCTCACGAGCATGCAACATTAATGGACTTCCTTTACAGTGCAAAGCTTCTGGTTCTCCTTTACCTGCTCCGGGCCCTGCAGTTCTTGGACGAAACGGCCCGCCTCTCCCTTCAATTGCTGTATCTCCCTTAAGCCCACAAGTTTCAAAAATCATGGCTCTGAGCGGAGCACAGAGAAATGAGAATTTGCAATTAGGAGCGGCACCAGCGGAAGCAGAAGCAGAAGCAGAAACTAGAGATCCAGAAATCCACCCAGTTTTGACTCTTCCATCTTATTCATCTTCTGTTTCCCCCTCTCTTCATGCATTTGTAATTAGGATAAAAGTGAGGCTGAGTATATCTAGTGCTCCTTCTTACAATTCTTATCTTGGTGAGACATAA 678 0.441 MEQFMSAFQIRMMLATLIVSSVNLVDGQVSTPCTTSMMSSFTPCANIITGSTNKVSMPSTTCCDSLRSLMSTNMDCACMVISANAPFFQQPISQALTLSLSRACNINGLPLQCKASGSPLPAPGPAVLGRNGPPLPSIAVSPLSPQVSKIMALSGAQRNENLQLGAAPAEAEAEAETRDPEIHPVLTLPSYSSSVSPSLHAFVIRIKVRLSISSAPSYNSYLGET* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1049 225 CDD AAI_LTSS 41 106 - -
Apr4g1049 225 SMART aai_6 33 113 IPR016140 -
Apr4g1049 225 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 10 202 IPR043325 -
Apr4g1049 225 PANTHER CLASSICAL ARABINOGALACTAN PROTEIN 9-LIKE 10 202 - -
Apr4g1049 225 Gene3D - 31 113 IPR036312 -
Apr4g1049 225 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 36 113 IPR036312 -
Apr4g1049 225 Pfam Probable lipid transfer 19 113 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1049 Apr-Chr4 8699393 8704340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1049 28 124 Lipid Metabolism Gene Families AT2G48140 53.608 1.86e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1049 - - aprc:113862111 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1049 4 8699393 8704340 Apr4g1049 4 8699393 8704340 ECH