Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1046 ATGTCGTCGTTGATAGCCGATTTCCTCCGTCAAACAGGCGGCACCGCTGTCATCGACGGCGGTCTTGCGACGGAGCTGGAACGTCACGGCGCAGACCTCAACGATCCCCTTTGGAGCGCCAGATGCCTCTTTTCCTCCCCTCACCTCATTCGTCAGGTGCACCTTGATTACTTGGAAAATGGTGCAGATATTATAATCACAGCATCTTATCAAGCCACCATTCAAGGTTTTAAAGCCAAAGGCTTTTCTGATGAAGAAAGTGAAGCCTTGCTCAGAAGGAGTGTTGAAATTGCTTGTGAGGCTCGTGATGTGTATTATGAAAGATGTGATTCGTGCTCTTCGGGTGATGGGGATATTGCTAGAATTCTCAAACGACGCCCTATCTTGGTTGCAGCATCAGTGGGAAGCTATGGAGCTCATTTGGCTGATGGATCAGAGTACAGTGGCAATTATGGTGATGCTATCACAGTGGAAACTCTTAAAGATTTTCATCGGAGAAGAGTTCAAATTTTAGCAGACTCAGGTGCTGATCTGCTTGCATTTGAAACAGTGCCAAATAAGATTGAGGCTAAGGCCTATGCTCAGCTTCTGGAAGAAGAGGAAATAAAGATTCCAGCATGGTTTTCTTTTAACTCTAAGGATGGAATTAATGTTGTCAGCGGTGATTCTGTAGAGGAATGCAGCTTTATTGCTGAATCATGCAATAAAGTTGTTGCTGTTGGAATGAACTGTACCCCACCTAGATTTATACATGATCTCATAGTTTTGCTTAAGAAGGTGACCACAAAACCAATTGTTATATATCCAAACAGTGGGGAAACTTATGATGCTGACCAAAAGGAGTGGGTGCAAAATACTGGTGTTACAGATGAAGATTTTGTCTCGTATGTGAATAAATGGTGTGAGTTAGGGGCTTCCCTTGTAGGTGGCTGTTGCAGAACGACTCCAGCTACTATTAGAGGGATATACAGGACACTATCCAACAATCAATCTGCTATTCTTGCCACCAAGTGA 1014 0.4398 MSSLIADFLRQTGGTAVIDGGLATELERHGADLNDPLWSARCLFSSPHLIRQVHLDYLENGADIIITASYQATIQGFKAKGFSDEESEALLRRSVEIACEARDVYYERCDSCSSGDGDIARILKRRPILVAASVGSYGAHLADGSEYSGNYGDAITVETLKDFHRRRVQILADSGADLLAFETVPNKIEAKAYAQLLEEEEIKIPAWFSFNSKDGINVVSGDSVEECSFIAESCNKVVAVGMNCTPPRFIHDLIVLLKKVTTKPIVIYPNSGETYDADQKEWVQNTGVTDEDFVSYVNKWCELGASLVGGCCRTTPATIRGIYRTLSNNQSAILATK* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1046 337 PIRSF BHMT 270 336 IPR017226 GO:0008168|GO:0008270|GO:0009086
Apr4g1046 337 PIRSF BHMT 5 113 IPR017226 GO:0008168|GO:0008270|GO:0009086
Apr4g1046 337 PANTHER HOMOCYSTEINE S-METHYLTRANSFERASE 2 2 332 - -
Apr4g1046 337 PANTHER ZGC:172121 2 332 - -
Apr4g1046 337 SUPERFAMILY Homocysteine S-methyltransferase 12 329 IPR036589 -
Apr4g1046 337 Pfam Homocysteine S-methyltransferase 17 324 IPR003726 -
Apr4g1046 337 ProSiteProfiles Homocysteine-binding domain profile. 4 326 IPR003726 -
Apr4g1046 337 Gene3D - 6 324 IPR036589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1046 Apr-Chr4 8675003 8680457 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1046 K00547 - gmx:100790567 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1046 4 8675003 8680457 Apr4g1046 4 8675003 8680457 ECH