Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1041 ATGGAACCAAAGTGCACAATAAACTGTCGCCGGCCGGAGTTTGCTCCGAGCGGCGGCACCCCTCTGCCGGAGAGTCCAAGAGTGCCAATGGAGTTTCTCTCACGGTCATGGAGTGCCTCAGCTCTTGAAGTCTCAAAAGCTCTTGCACCTCAACCTCCTCTCTCTTCTTGCATGCCAAATTCCATTAAGACTACTATTTCTATTCCTGAAGAATCTGCTCCTAACTCTCTCTCTGAGGACTTTTCAACCATGTCAAAGAACCAGTTCTCTTTCGCTTCCTCAGCTACCTCTCAGCTTGTACTTGAACGCATCATGTCACAGTCAGAAGTGTCTCCATTAACATCAGGTAGGTTATCTCACAGCAGTGAGCCTTTGAATGGTGGTGGTTCATTGACGGGAACAGATAGCCCTCCAATTTCACCTTCAGATGAATTTGATGATGTTGTTAAGTTTTTTCGAGCAAACAATTCCATTCACCCGTTATTCAATGGTGGACGAGCCAGTGCAACTATTGGCAATGGCACGGCTTGCTCAGGACCTAAAACTGTTGGAAGATGGTTGAAAGACAGAAGAGAAAAGAAGAAGGAAGAAAACAGAACCCATAATGCTCAGCTGCATGCCACTATTTCAGTGGCTGCAGTGGCCGCTGCTGTAGCAGCCATTGCAGCTGCAACAGCAGCCTCATCTGCACCCAACAAGGATGAGAAGATGGCAAAGACAGACATGGCTGTTGCTTCTGCAGCCACATTAGTTGCTGCACAGTGTGTTGAGGCTGCAGAAGCAATGGGAGCTGAGCGTGACCACCTCGCTTCTGTGGTCAGCTCTGCTGTAAACGTACGTTCTCATGATGATATCACTACTCTTACTGCTGCAGCTGCCACAGCTCTACGAGGAGCAGCAACATTGAAAGCAAGAGCTTTGAAGGAGGTATGGAACATTGCTGCAGTGACGCCACTAGAGAAAGGCATTGGGGGTATTGGACTATGTGGTAAAAATAACAACAATAATAACAGCAATGCCAGCAATACCAGCACCAGTGATAGTGGGGAAGTTTTCAATGGAGAAAATTTTCTTGGTGCCTGCAGCCAAGAGCTACTTGCTAGGGGTAGTGAATTACTCAAACGAACCCGGAAAGGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACACCGAACGGGCCAGGTAATGTTGAAAATGAAGAGCAGACATGTTGCAGGAACCATTACCAAAAAGAAAAAGAATGTTGTGTTAGATATATGCACCGATTTGCCAGCGTGGCCAGGAAGACATCTGTTGGATGATGGAGAAAAGCGAAGGTACTTTGGATTGAAGACAGATTCAAGGGGGATTGTGGAATTTGAGTGTCGAAATCAAAGAGAATATGATATCTGGACACAAGGGGTTTCAAGGCTTCTCTCAATTGTTGCGCAAAGACAAAAAGGATATGGGAACTGA 1458 0.4616 MEPKCTINCRRPEFAPSGGTPLPESPRVPMEFLSRSWSASALEVSKALAPQPPLSSCMPNSIKTTISIPEESAPNSLSEDFSTMSKNQFSFASSATSQLVLERIMSQSEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRASATIGNGTACSGPKTVGRWLKDRREKKKEENRTHNAQLHATISVAAVAAAVAAIAAATAASSAPNKDEKMAKTDMAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNIAAVTPLEKGIGGIGLCGKNNNNNNSNASNTSTSDSGEVFNGENFLGACSQELLARGSELLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVLDICTDLPAWPGRHLLDDGEKRRYFGLKTDSRGIVEFECRNQREYDIWTQGVSRLLSIVAQRQKGYGN* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1041 485 PANTHER EXPRESSED PROTEIN 1 484 IPR040269 -
Apr4g1041 485 MobiDBLite consensus disorder prediction 1 26 - -
Apr4g1041 485 Pfam Auxin canalisation 23 322 IPR008546 -
Apr4g1041 485 PANTHER AUXIN CANALIZATION PROTEIN 1 484 - -
Apr4g1041 485 Pfam Plant pleckstrin homology-like region 371 476 IPR013666 -
Apr4g1041 485 MobiDBLite consensus disorder prediction 111 139 - -
Apr4g1041 485 MobiDBLite consensus disorder prediction 111 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1041 Apr-Chr4 8608799 8612915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1041 - - gmx:100793202 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1041 4 8608799 8612915 Apr4g1041 4 8608799 8612915 ECH
Apr4g1041 4 8608799 8612915 Apr8g0258 8 2077055 2080361 PCT