Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1027 ATGCCTTTCACAATGAAGATCCAACCGATTGATTCTCACGCGCCTCAGGAGGAGACTAGGCTTGAGCCGGTCAAGCCGGTGGTCAAGTCGCGGCTGAAGCGGCTCTTTGAGCGCCAGTTCTCCGGCGTTCTCCGGAATTCGCCGGCGGAGAAGGTCAGCGGCGAGGAGTCGCATTTAGGCAAGGATGGCTCGAACAACGGCTCAGCTGATTGGGAACCGAGCTCGGCATGTCTAGCGAAAATGGTGCAGAATTTTATGGAAGAGAATCACGAGAAGCACTCCGTTTCCGTCAAATGTGCACGTAACCGCTACATCTTCTGTGATGACAGCTCAGACGCCGAAACACATTCGCTTGGTGGTTTCAGCGACTCATACTATTCGTCGTCCGGTGAAGCGTACGAAATCCTCAAGGGTTTGGTGGCATGTTCGAGTGTGTATGAAAGGAATTTGTTAGCGGACATCACTAAGATAATTGAAAAGAACAAAACAACATGCAAGCGCAAAGATGATTGTTGCAGAAAGATTGTTTCTGAGGGTTTGTTAGCTTTAGGATTTGATGCTTCAATCTGCAAATCTCGGTGGGATAAATCACCTTTTTGTCCAGCGGGTGAATATGAATACATTGACGTGATAATGGGAAATGAGCGGGTGGTGGTTGACGTTGACTTGAGATCGGAATTTGAGATTGCTCGACCGACCAAGACGTACAAGGCCATTCTTCAAACGCTTCCCCATGTATTCGTGGGCTCGTGCGATCGGTTGCACAGCATCGTAGCCATCGCATCAGAGGCAGCGAAACTGAGTTTGAAGAAAAGGGGCATGCACGTTCCGCCGTGGAGGAAAGTTGAATACGTCAGAGCAAAATGGTTCTCCCCTTACACCCGCGGAGTCAAGGAGGAAAACCAAGAAAAGCAGAAACTTTTGATGGGAAATGGTAGTAACAAGTCTGAACAGTCGGGGTTAACTGGGTCTGAAACTTCATGTGAAGATGATGTTAATGTTAAGTCAAAGCTTTTGGTTCAATGGAAGCCACAGGAGATGAAACCCAAGAGCTCACAGTCTGGTTTGGCAGCTGCCTTCCATGAAAACCCATAA 1095 0.484 MPFTMKIQPIDSHAPQEETRLEPVKPVVKSRLKRLFERQFSGVLRNSPAEKVSGEESHLGKDGSNNGSADWEPSSACLAKMVQNFMEENHEKHSVSVKCARNRYIFCDDSSDAETHSLGGFSDSYYSSSGEAYEILKGLVACSSVYERNLLADITKIIEKNKTTCKRKDDCCRKIVSEGLLALGFDASICKSRWDKSPFCPAGEYEYIDVIMGNERVVVDVDLRSEFEIARPTKTYKAILQTLPHVFVGSCDRLHSIVAIASEAAKLSLKKRGMHVPPWRKVEYVRAKWFSPYTRGVKEENQEKQKLLMGNGSNKSEQSGLTGSETSCEDDVNVKSKLLVQWKPQEMKPKSSQSGLAAAFHENP* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1027 364 PANTHER OS03G0796600 PROTEIN 25 357 IPR006502 -
Apr4g1027 364 MobiDBLite consensus disorder prediction 47 72 - -
Apr4g1027 364 MobiDBLite consensus disorder prediction 343 364 - -
Apr4g1027 364 MobiDBLite consensus disorder prediction 346 364 - -
Apr4g1027 364 PANTHER RNA POLYMERASE SUBUNIT BETA-BETA PROTEIN, PUTATIVE (DUF506)-RELATED 25 357 - -
Apr4g1027 364 MobiDBLite consensus disorder prediction 309 329 - -
Apr4g1027 364 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 173 295 IPR006502 -
Apr4g1027 364 Pfam PDDEXK-like family of unknown function 80 295 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1027 Apr-Chr4 8462019 8464366 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1027 - - gmx:100796711 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1027 4 8462019 8464366 Apr8g0276 8 2273633 2275745 PCT