Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1023 ATGGCTATTTCCCTGAAGTCAAATTGCTTCTTGCTATTGAAGAAACCCGAGGCCAGTTTCCAGGCTGGTTTTTGCCCCAAGAGAACCACAGTCTCTGTTAAAAGATACACTCCAGTGGCTGCTATCAAGACCATGGAAGCTGTGGGGCTATCTGAAACATTTACCAAATTGAAAGAAAAGGGAAAATATATTTGTTTGAAGGTGGCTTTCATCCCATACATAACAGCTGGTGATCCTGACCTTTCAACCACTGCAGAAGCGCTGAAAGTGCTTGATTCATGTGGGTCTGACATAATTGAGCTTGGTGTTCCATACTCTGATCCCTTGGCTGATGGTCCTGTTATCCAGGCTGCTGCAACAAGATCTCTAGCAAAGGGGACCAATTTTAATGCAATTATTTCTATGTTGAAGGAGGTTGTTCCACAATTGTCATGTCCACTTGCTCTATTTACATATTACAATCCAATACTGAAGCGTGGTACTGAGAAATTTATGTCCACCATAAGAGACACTGGTGTACATGGACTTGTAGTCCCAGATGTCCCTCTGGAGGAGACGGAGAATTTGAGGACAGAAGCTAAGAAGAATGGAATTGAACTGGTGCTCCTCACAACACCCACTACACCAACAAACCGAATGAAAGCCATTGTTGATGCTGCAGAAGGATTTGTGTATCTTGTGAGCTCGGTGGGTGTCACTGGAGCCCGAGCATCAGTTAGTAATAATGTTCAGGGTCTGTTGCAGGAAATAAAACAGGCAACAACTAAACCTGTGGCAGTTGGTTTCGGAATATCAAAACCCGAGCATGTGAAACAGGTGGCAGGATGGGGAGCTGATGGTGTGATTGTTGGCAGTGCTATGGTGAAGTTACTTGGTGAGGCCAAATCTCCTCAAGAGGGACTGAGAGAGCTGGAAAATTTCACCCGCTCCCTGAAAGAGGCACTACCTTGA 951 0.4501 MAISLKSNCFLLLKKPEASFQAGFCPKRTTVSVKRYTPVAAIKTMEAVGLSETFTKLKEKGKYICLKVAFIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLAKGTNFNAIISMLKEVVPQLSCPLALFTYYNPILKRGTEKFMSTIRDTGVHGLVVPDVPLEETENLRTEAKKNGIELVLLTTPTTPTNRMKAIVDAAEGFVYLVSSVGVTGARASVSNNVQGLLQEIKQATTKPVAVGFGISKPEHVKQVAGWGADGVIVGSAMVKLLGEAKSPQEGLRELENFTRSLKEALP* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1023 316 Coils Coil 236 256 - -
Apr4g1023 316 Hamap Tryptophan synthase alpha chain [trpA]. 60 314 IPR002028 GO:0004834|GO:0006568
Apr4g1023 316 PANTHER TRYPTOPHAN SYNTHASE ALPHA CHAIN 46 315 - -
Apr4g1023 316 PANTHER TRYPTOPHAN SYNTHASE, ALPHA CHAIN 46 315 IPR002028 GO:0004834|GO:0006568
Apr4g1023 316 TIGRFAM trpA: tryptophan synthase, alpha subunit 67 312 IPR002028 GO:0004834|GO:0006568
Apr4g1023 316 Pfam Tryptophan synthase alpha chain 67 314 IPR002028 GO:0004834|GO:0006568
Apr4g1023 316 SUPERFAMILY Ribulose-phoshate binding barrel 51 295 IPR011060 -
Apr4g1023 316 Gene3D Aldolase class I 49 316 IPR013785 -
Apr4g1023 316 ProSitePatterns Tryptophan synthase alpha chain signature. 99 112 IPR018204 GO:0004834
Apr4g1023 316 CDD Tryptophan_synthase_alpha 69 312 IPR002028 GO:0004834|GO:0006568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1023 K01695 - gmx:100808400 516.153