Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1017 ATGGCCACTTCAATCTCAAAGAAACCAAGCGTTCCATGTGAGGACTCCTCATCCTCCACCCTGGAGACCCAACAAGACCAGAAACCAAAAACAATAACAGAGGCATGGCGCAAAATCCACGGCGAAGACAACTGGGCCGGGCTCCTCGACCCCATGGATCCTCTAATGCGAGCCGAACTGACCCGCTACGGCGACATGGCCCAAGCCTGCTACGACGCCTTCGACTTCGACCCATACTCAAAATACTGCGGCAACTGCAAGTACCCACTAACGAAATTTTTCGAGGCTCTAGACATGACCCGCTTGGGATACACCGTCACCTGCTACCTCTACGCGACTGCGAACATAAACCTCCCCAACTTCTTCCGCAAGTCGCGTTGGCCCGACAAGATGTGGAGCAAACACGCCAACTGGGCTGGATACGTTGCCGTTTCCGACGACGCGACGAGCAAGCGATTGGGAAGAAGAGACATAACAGTCGCGTGGCGAGGGACGGTCACGCACGTGGAGTGGGTCGCTGACCTCAAAAATTTCCTCAAACCAGTTTCCCCTGACATCCCTTGCCCCGACAAAAAAGTTAAGGTCGAAGCCGGTTTCTTAGACTTCTACACCGACAGAGAAACCGATTGCGGCTATTGTAAAAACTCGGCGAGGGAACAGGTACTCGCTGAGGTGAAGAGGTTGTTGGATTTGTACGCTAACGAGGAAGTTAGTGTTACTATTACCGGTCACAGCCTTGGGAGTGCGATGGCTATATTGAGCGCGTTTGATATTGTTGAAACGGGGTTGCACGTAAGAACGGATGGGCGTAGAGCGCACGTGTCGGTGTTTTCGTTTTCGGGGCCGAGAGTGGGAAACATGAGGTTCAAGGAGAGGTTGGAGGAGAAGCTGGGGATTAAGGTGTTGAGGGTTCATAATACTCACGATTTGGTGCCTCAGTCGCCGGGATTATTCTTCAACGAGAGTTCGCCGGCGTGCGTGGTGAAGATGGTTCAGTGGTTGCCGTGGTGTTATTTGCACGTTGGGGTTGAGTTAATGTTGGATCATAAGAAATCGCCTTTTCTGAACCCCGATGGGGATAGTGCCTGCGCCCATAACTTGGAGGCTCAGTTGCACTTGATAGACGGATACCAGGGAAGGAATCTTAGATTTGAGTTAGTGACTGGGAGGGACATTGCTCTTGTGAACAAGGACTCTGACTTTCTGAAAGATGAGCATTTGGTGCCACCGCGTTGGAGGCAAGACATGAACAAGGGCATGATCAAGACTGAAGATGGTCGCTGGGTGCAAGCTGATCGCCCAGAACTTCACGGTCACCCTGAAGATATTGATCACTATCTCTCTGATACAGGCTTGCTTTCATCTCGTAGTTGA 1374 0.5167 MATSISKKPSVPCEDSSSSTLETQQDQKPKTITEAWRKIHGEDNWAGLLDPMDPLMRAELTRYGDMAQACYDAFDFDPYSKYCGNCKYPLTKFFEALDMTRLGYTVTCYLYATANINLPNFFRKSRWPDKMWSKHANWAGYVAVSDDATSKRLGRRDITVAWRGTVTHVEWVADLKNFLKPVSPDIPCPDKKVKVEAGFLDFYTDRETDCGYCKNSAREQVLAEVKRLLDLYANEEVSVTITGHSLGSAMAILSAFDIVETGLHVRTDGRRAHVSVFSFSGPRVGNMRFKERLEEKLGIKVLRVHNTHDLVPQSPGLFFNESSPACVVKMVQWLPWCYLHVGVELMLDHKKSPFLNPDGDSACAHNLEAQLHLIDGYQGRNLRFELVTGRDIALVNKDSDFLKDEHLVPPRWRQDMNKGMIKTEDGRWVQADRPELHGHPEDIDHYLSDTGLLSSRS* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1017 457 MobiDBLite consensus disorder prediction 1 30 - -
Apr4g1017 457 PANTHER PHOSPHOLIPASE A1 14 451 - -
Apr4g1017 457 SUPERFAMILY alpha/beta-Hydrolases 120 375 IPR029058 -
Apr4g1017 457 CDD Lipase_3 98 349 - -
Apr4g1017 457 Gene3D alpha/beta hydrolase 35 443 IPR029058 -
Apr4g1017 457 MobiDBLite consensus disorder prediction 434 457 - -
Apr4g1017 457 Pfam Lipase (class 3) 160 317 IPR002921 GO:0006629
Apr4g1017 457 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 14 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1017 Apr-Chr4 8357774 8359480 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1017 24 452 Acyl Lipid Metabolism Gene Families AT2G30550 59.310 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1017 - - gmx:100815007 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1017 4 8357774 8359480 Apr8g0284 8 2381837 2385260 PCT