Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0667 ATGTGGAGCTCAAGAATGAGGTTGATGCTTGGTGTTGGAGCCATTGCTCTGATCCTTCTTCTCTCATCGGCTTCAGCGGACGACGTCGTTGTGCTCACAGAGAACACATTCGAAAATGAGGTCGGCAAGGATCGCGGTGCTCTCGTTGAGTTTTACGCTCCCTGGTGTGGACACTGTAAAAAGCTTGCCCCAGAATATGAACAGCTCGGAGCTAGTTTTAAGAAAACTAATTCCGTTTTGATTGGGAAGGTGGATTGTGATGAACATAAGAGTGTTTGTAGTAAATATGGGGTTTCTGGTTACCCTACAATTAAGTGGTTTCCTAAGGGATCTCTTGAGCCAAGGAAATATGAAGGTGCACGTACTGCGGAAGCCCTTGCTGCGTTTGTGAACATGGAAGCAGGCACCAATGTGAAGATAGTTTCTGTTCCATCCAGTGTGGTAATTCTCTCTCAAGATAACTTTGATGAGATTGTCTTGGACGAAACAAAAGATGTTCTGGTGGAATTCTATGCACCATGGTGTGGTCATTGCAAGGCCCTTGCCCCTATTTATGAAAAGGTTGCTGCAGCATTTAAACTAGAGGAAGAAGTTGTTATAGCCAACGTTGATGCTGACAAGTATAAGGATTTGGCTGAGAAATACGGCGTTAGTGGCTACCCCACACTGAAGTTTTTTCCAACGAGAAATAAAGCTGGTGAAGATTATGATGGTGGCCGCGATTTGGGTGATTTTGTAGCCTTCATCAACGAGAAATGTGGTACATACCGTGATGGGAAGGGGCAACTTACTTCTAAAGCTGGTGTGATTGCTTCTCTGGATGACTTGGTGAAGGAGTTTGTGAGTGCTGATGACAATGAGAAGAGGACAGTATTTTCCCGGCTTGAGGAGGAAGTTAAGAAGCTTAAAGGTTCTGCTGCAAGACATGGCAGTCTCTACTTAAAACTTGCTAAGAACAGTATGGAAAAGGGTGCAGACTATGCAAAGAATGAAATTCAACGTCTTGAGCGCATGCTTGAGAAGTCAATCAGCCCAGCAAAAGCTGATGAATTCACCCTTAAAAAGAACATCTTATCTATCTTTGGTTGA 1089 0.4399 MWSSRMRLMLGVGAIALILLLSSASADDVVVLTENTFENEVGKDRGALVEFYAPWCGHCKKLAPEYEQLGASFKKTNSVLIGKVDCDEHKSVCSKYGVSGYPTIKWFPKGSLEPRKYEGARTAEALAAFVNMEAGTNVKIVSVPSSVVILSQDNFDEIVLDETKDVLVEFYAPWCGHCKALAPIYEKVAAAFKLEEEVVIANVDADKYKDLAEKYGVSGYPTLKFFPTRNKAGEDYDGGRDLGDFVAFINEKCGTYRDGKGQLTSKAGVIASLDDLVKEFVSADDNEKRTVFSRLEEEVKKLKGSAARHGSLYLKLAKNSMEKGADYAKNEIQRLERMLEKSISPAKADEFTLKKNILSIFG* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0667 362 CDD PDI_a_ERp38 28 130 - -
Apr4g0667 362 CDD ERp29c 270 361 IPR011679 GO:0005783
Apr4g0667 362 ProSitePatterns Thioredoxin family active site. 167 185 IPR017937 -
Apr4g0667 362 Gene3D Glutaredoxin 22 137 - -
Apr4g0667 362 CDD PDI_a_ERp38 146 249 - -
Apr4g0667 362 Gene3D - 266 362 IPR036356 -
Apr4g0667 362 PRINTS Thioredoxin family signature 166 174 - -
Apr4g0667 362 PRINTS Thioredoxin family signature 174 183 - -
Apr4g0667 362 PRINTS Thioredoxin family signature 216 227 - -
Apr4g0667 362 SUPERFAMILY ERP29 C domain-like 267 361 IPR036356 -
Apr4g0667 362 PANTHER PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED 18 361 - -
Apr4g0667 362 PANTHER PROTEIN DISULFIDE ISOMERASE-LIKE 2-1 18 361 - -
Apr4g0667 362 Coils Coil 318 338 - -
Apr4g0667 362 SUPERFAMILY Thioredoxin-like 27 131 IPR036249 -
Apr4g0667 362 ProSiteProfiles Thioredoxin domain profile. 8 135 IPR013766 -
Apr4g0667 362 SUPERFAMILY Thioredoxin-like 144 256 IPR036249 -
Apr4g0667 362 Pfam Thioredoxin 147 250 IPR013766 -
Apr4g0667 362 Pfam Thioredoxin 29 131 IPR013766 -
Apr4g0667 362 Gene3D Glutaredoxin 138 252 - -
Apr4g0667 362 TIGRFAM pdi_dom: protein disulfide-isomerase domain 150 252 IPR005788 GO:0003756
Apr4g0667 362 TIGRFAM pdi_dom: protein disulfide-isomerase domain 32 132 IPR005788 GO:0003756
Apr4g0667 362 ProSitePatterns Thioredoxin family active site. 48 66 IPR017937 -
Apr4g0667 362 ProSiteProfiles Thioredoxin domain profile. 137 254 IPR013766 -
Apr4g0667 362 Pfam Endoplasmic reticulum protein ERp29, C-terminal domain 268 361 IPR011679 GO:0005783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0667 Apr-Chr4 5495618 5499232 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0667 K09584 - gmx:100037472 623.239