Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0663 ATGTCATGTTTCCTACGAAAATCGCTTAGGATGAGGGGATTGTCATCGTTTCTGCACAAACTTATCGGAAACTCGTCGGAGTTGCATCACATTCTCTCTTCGTCAACGTGTCGCCACTTGTCACATTCCTTTAACCACAAGACCAGCTACTTTCACGGGCCTCAGCGCCCTCGCTTTTGGGCTTCTGAAGCCGCCGCCACTGAACCCTCAACCTCGGACGGGCTCACGGTGCAAGGAATTCTAGCCCATAATTGGACCATTCTTGACGAAAACGACAGCGATTGGAAGAGTCATGCCACCGCCATAGCTCAATCCATTCATTTAATCAAACGGTGGTTACAGTGGAGGAAATTGAAAGTGAGGTTGGGTTTGTTATCGGCGGAGCTGAATAAAGCAGAGCTTTGGGATGATCCGGTGCATGCTGGAAAAATAAGCCGAGAGCATGGTTCGCTACTGGGAAAAATGAAAGAGGTAAATGCGTTGGAGGAAGATTTACTTGAGCATATTGACATGATCAAGCTTGCTCGTGAAGAAAATGATGCAGATTTGGAATCGGAATCATTGAAAGTGTTGCATAGCATGAGAAGAAGTGCAAAAGAGAAAGAACTAGAGGCATTGCTTTCTGGGGAGCAAGATTCTTGTTCTTGCTACATTGAGGTTCAAGCTGGGGCTGGGGGTACTGAGAGCATGGACTGGGCTGCAATGGTTATGCAGATGTATAAGTCATGGGCCCAGCAACGAGGATATAAAGTAACCGTAATGGACGAAATGCCTGGTGAGCTTGCAGGAATCAAGCGAGCTACCATCAAAGTAGATGGTGAGTTTGCATTTGGATATGCCAAAGCAGAAGTAGGAGTGCACAGGTTGGTGCGGATATCACCCTTTGACAGTAATAAGCGCCGGCATACTTCATTTGCTGCTGTGGCAGTTATTCCAATTCTTGATGATGGATCTACCCATGTACAAATTAATGAATCTGATCTTCGAATTGAACGATTTCGGGCTGGTGGCGCTGGTGGCCAACATGTTAACACAACTGAGAGTGCTGTAAGAATAATTCATATTCCTACAGGAGTTACTGCAACTTGTCAGAATGAAAGATCACAACATCAGAATAAGGCTTCAGCAATGGCTGTGCTTCAGTCGAGATTAGACCAACTGGAGATGGCACGTCAGGCTAAGTTGAATGCACAGCATACACAATCTCTCACTGACATTACTTGGGGCAGTCAGATTCGTAGTTATGTGCTTCATCCTTACCGTATGGTGAAAGATCTTAGAACTAACTATGAGGTTTCAGATCCTGACTCTGTCCTTGAGGGAGATATAGACGGTTTCATCCTGAGCTATCTATCAGCTTCTTTGGATAAAGACGAAGATGCTGCTTAA 1389 0.4543 MSCFLRKSLRMRGLSSFLHKLIGNSSELHHILSSSTCRHLSHSFNHKTSYFHGPQRPRFWASEAAATEPSTSDGLTVQGILAHNWTILDENDSDWKSHATAIAQSIHLIKRWLQWRKLKVRLGLLSAELNKAELWDDPVHAGKISREHGSLLGKMKEVNALEEDLLEHIDMIKLAREENDADLESESLKVLHSMRRSAKEKELEALLSGEQDSCSCYIEVQAGAGGTESMDWAAMVMQMYKSWAQQRGYKVTVMDEMPGELAGIKRATIKVDGEFAFGYAKAEVGVHRLVRISPFDSNKRRHTSFAAVAVIPILDDGSTHVQINESDLRIERFRAGGAGGQHVNTTESAVRIIHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEMARQAKLNAQHTQSLTDITWGSQIRSYVLHPYRMVKDLRTNYEVSDPDSVLEGDIDGFILSYLSASLDKDEDAA* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0663 462 Gene3D - 314 410 - -
Apr4g0663 462 Coils Coil 158 178 - -
Apr4g0663 462 ProSitePatterns Prokaryotic-type class I peptide chain release factors signature. 334 350 IPR000352 GO:0003747|GO:0006415
Apr4g0663 462 Gene3D - 218 447 - -
Apr4g0663 462 PANTHER PEPTIDE CHAIN RELEASE FACTOR PRFB1, CHLOROPLASTIC-RELATED 70 460 - -
Apr4g0663 462 PANTHER PEPTIDE CHAIN RELEASE FACTOR 2 70 460 - -
Apr4g0663 462 Coils Coil 377 397 - -
Apr4g0663 462 Pfam RF-1 domain 320 427 IPR000352 GO:0003747|GO:0006415
Apr4g0663 462 Hamap Peptide chain release factor 2 [prfB]. 91 455 IPR004374 GO:0005737|GO:0006415|GO:0016149
Apr4g0663 462 SMART PCRF_a_2 173 283 IPR005139 GO:0006415
Apr4g0663 462 SUPERFAMILY Release factor 120 454 IPR045853 -
Apr4g0663 462 TIGRFAM prfB: peptide chain release factor 2 95 453 IPR004374 GO:0005737|GO:0006415|GO:0016149
Apr4g0663 462 Pfam PCRF domain 121 308 IPR005139 GO:0006415
Apr4g0663 462 Gene3D Release factor 93 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0663 Apr-Chr4 5478742 5481878 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0663 K02836 - gmx:100797427 771.155