Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0659 ATGGGTTCTCTGGTAGCTCAAGTTGCCAAGAAGAAAGCAATGTGGCTGTGTCCAAAGGTTTTGGGTTCTAATCCTTCCGAAAGATGGGGGCACTCTGCTTGCTTCTCCAAGGGGCTTATGTATGTCTTTGGGGGTTGCTGTGGGGGACTGCATTTTTGCGATGTTCTGACTTTGGACCTTAACAAAATGGTTTGGAGCAAGCTTGCTACGACGGGTGAAAAGCCAGGGCCTAGAGATAGCCATAGTGCTGTCCTTGTAGGGCATAAAATGATAGTGTTTGGTGGCACAAATGGCTTCAAGAAGGTGAATCATATTCATATATTGGATCTTGTTACTAAAGAGTGGGTTCGCCCTGAATGTAAAGGGACTCCTCCTTCTCCACGTGAAAGCCATACTGCCACACTCGTTGGTGATGAAAGATTAGTGATATTTGGTGGTAGTGGAGAAGGCCATGCTAATTATTTAAATGATTTGCATATTCTTGATCTTCGGACCATGAATTGGACTTCTCCTGAGTTGAAAGGTGACTTGCCTGTCCCTAGAGACAGTCACAGTACCCTTGCAATTGGGAACAAACTTATTGTGTATGGTGGAGACTCAGGTGATCAATATCATGGCAATGTTCATATGCTTGATATGGCAACAATGACTTGGACTAGAATGACAATTCAAGGTTCTCCACCAGGAGTCAGGGCAGGTCATGCTGCTGTGAATATTGGAACAAAGGTCTATATCATTGGAGGAGTTGGAGATAAACGGTACTATAATGACGTTTGGATCTTTGATATCTGCACTTGTTCATGGACGCAACTTGATATACGCGGTCAACAGCTGCAAGGGCGATTTTCTCACACGGCTGTTGTTGTAGACATGGATATTGCCGTATATGGCGGGTGTGGGGAAGATGAACGTCCTCTCAATGAACTGTTAGTGTTGCAGCTAGGAGCAGAGCACCCAAATGGACATTACCACATTCCCATGTGCAAACCTTTTGGAACTTACTGGAATCAAGACAAGAAGATTATCACAGGAGAAGCAGATACTAACTCGGTACTGAAGTTGATGTAA 1068 0.4438 MGSLVAQVAKKKAMWLCPKVLGSNPSERWGHSACFSKGLMYVFGGCCGGLHFCDVLTLDLNKMVWSKLATTGEKPGPRDSHSAVLVGHKMIVFGGTNGFKKVNHIHILDLVTKEWVRPECKGTPPSPRESHTATLVGDERLVIFGGSGEGHANYLNDLHILDLRTMNWTSPELKGDLPVPRDSHSTLAIGNKLIVYGGDSGDQYHGNVHMLDMATMTWTRMTIQGSPPGVRAGHAAVNIGTKVYIIGGVGDKRYYNDVWIFDICTCSWTQLDIRGQQLQGRFSHTAVVVDMDIAVYGGCGEDERPLNELLVLQLGAEHPNGHYHIPMCKPFGTYWNQDKKIITGEADTNSVLKLM* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0659 355 PANTHER KELCH REPEAT DOMAIN 1 350 - -
Apr4g0659 355 PANTHER OS01G0300900 PROTEIN 1 350 - -
Apr4g0659 355 SUPERFAMILY Kelch motif 20 221 IPR015915 GO:0005515
Apr4g0659 355 Pfam Kelch motif 231 271 IPR006652 GO:0005515
Apr4g0659 355 Gene3D - 12 120 IPR015915 GO:0005515
Apr4g0659 355 Pfam Galactose oxidase, central domain 280 313 - -
Apr4g0659 355 Gene3D - 121 353 IPR015915 GO:0005515
Apr4g0659 355 Pfam Galactose oxidase, central domain 139 189 - -
Apr4g0659 355 Pfam Galactose oxidase, central domain 39 85 - -
Apr4g0659 355 Pfam Galactose oxidase, central domain 87 135 - -
Apr4g0659 355 SMART kelc_smart 140 191 IPR006652 GO:0005515
Apr4g0659 355 SMART kelc_smart 192 241 IPR006652 GO:0005515
Apr4g0659 355 SMART kelc_smart 242 291 IPR006652 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0659 111 314 Acyl Lipid Metabolism Gene Families AT3G05420 32.258 3.05e-23 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0659 K20285 - gmx:100796366 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0659 4 5444076 5446562 Apr4g0659 4 5444076 5446562 ECH