Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0646 ATGGGTTGTGGCGGTGCATTCTCACTGCAATTACTATTATTATTTGTGTTTCTATGGAAGCTCTCAGCCTCCAGTCCAGGTGCCGGTGGGTGTGATAAGCCTCCGGTGCTGTTTGTGTTCGGAGATTCTAACTCGGACACGGGTGGACTCGTCTCCGGACTCGGTTTCCCTATAAATCTTCCCAATGGCCGCACTTTTTTTCGCAGATCCACTGGTCGCTTATCCGATGGACGCCTCATCATTGACCTACTCTGCCAAAGTTTGAATGCAAGTTTGTTGACACCATACTTGGACGCCTTGTCTGGAATGTCATTCACAAATGGAGCAAACTTTGCTGTGGTAGGGTCCTCTACCCTCCCCAAATATGTTCCTTTCTCCTTAAATATACAGGTCATGCAGTTCCGGCATTTCAAAGCTCGTGTCCTTGAACTTGTTACCACAGGTGCAAGAAATTTGATCAATGATGAAAGCTTCCGGGATGCACTCTACCTGATTGATATTGGACAAAACGACCTTGCTGATTCATTTTCCAAAAATCTGTCATATGCGCTAGTTGTCAAGAAGATCCCAGCGTTTATCGCTGAAATTGAGAGTGCTGTTAAGAGTTTGTATAATGAAGGTGCCAGGAAGTTTTGGGTCCACAATACTGGGCCCTTGGGCTGTCTTCCTAAAATACTTGCACTGGCTCAGAAGAAAGATCTGGATTCATCTGGGTGTCTCCCTAGTTATAACACTGCAGCAAGATTGTTTAATGAAGCGCTGCTTCATTTGACTCAGAAACTAAGAACTGAATTGAAGGATGCTACATTAGTCTATGTTGATATTTATGCCATTAAGAATGACCTCATCACAAATGCCACAAAATATGGTTTCACAAATCCTTTGACGGTATGCTGCGGCTATGGAGGGCCTCCTTACAATTTTGATGTGAGGGTAACATGTGGTCAACCTGGTTATCAGGTTTGTGATGAAGGATCTCGGTATGTGAGTTGGGATGGAATTCATCATACTGAGGCTGCAAATACATTTATAGCTTCTAAGATACTTTCCATGGCTTATTCTACACCACGGACACCTTTTGATTTCTTCTGCCGCCACTGA 1101 0.4405 MGCGGAFSLQLLLLFVFLWKLSASSPGAGGCDKPPVLFVFGDSNSDTGGLVSGLGFPINLPNGRTFFRRSTGRLSDGRLIIDLLCQSLNASLLTPYLDALSGMSFTNGANFAVVGSSTLPKYVPFSLNIQVMQFRHFKARVLELVTTGARNLINDESFRDALYLIDIGQNDLADSFSKNLSYALVVKKIPAFIAEIESAVKSLYNEGARKFWVHNTGPLGCLPKILALAQKKDLDSSGCLPSYNTAARLFNEALLHLTQKLRTELKDATLVYVDIYAIKNDLITNATKYGFTNPLTVCCGYGGPPYNFDVRVTCGQPGYQVCDEGSRYVSWDGIHHTEAANTFIASKILSMAYSTPRTPFDFFCRH* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0646 366 Pfam GDSL-like Lipase/Acylhydrolase 37 348 IPR001087 GO:0016788
Apr4g0646 366 SUPERFAMILY SGNH hydrolase 37 350 - -
Apr4g0646 366 Gene3D SGNH hydrolase 33 354 IPR036514 -
Apr4g0646 366 PANTHER OS01G0329900 PROTEIN 12 365 - -
Apr4g0646 366 CDD SGNH_plant_lipase_like 35 350 IPR035669 -
Apr4g0646 366 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 12 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0646 Apr-Chr4 5347460 5352425 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0646 35 355 Acyl Lipid Metabolism Gene Families AT4G10950 27.193 1.10e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0646 - - gmx:100797617 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0646 4 5347460 5352425 Apr4g0646 4 5347460 5352425 ECH