Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0640 ATGGGGTTCCAAAACTTGGTATTGACATATTTTATGTTGGTAATGGTTGTTGATCAATTTGGGAATTGCAAAGTTACCATTGGTCCTCATAATCACTCATACAAACACTTAGCCACCAAAATGATTGAGGATCGTGGTTTTATTCAACGAAATGGCACCCGTTTTGTTCTAAATGGAAAGCCACACTACTTAAATGGGTTCAATGCCTATTGGTTGATGATTATGGCATCTGAGGCATCTACAATGTCCAAGGTTACTACAATCTTTCAAGAAGCTTCCCTGCACGGTTTAAACGTAGCAAGAACCTGGGCCTTCAACGATAGAGGTTACAAAGCCCTTCAGATTTCTCCAGGTTCTTATGATGAAAATGTCTTCAAGGGTTTGGATTTTGTGATATCAGAAGCAGGGAGATGTGGGGTGCGACTGATACTAGTCTTAGTTAACAACTGGAAGAATTTGGGTGGGAAGAGTCAGTATGTGGAATGGGCAAGGGAACGTGGCCAGCAAGTAAAAAACGATGATGAATTCTTCACACACCCCATTATTAAGCAATACTACAAAAATCATGTCAAGACTGTCTTGACAAGAAAGAACACTATAACTGGACTAGCATATAAGGACGACCCCACCATTTTCTCATGGGAGCTTATCAATGAACCTCGTTCCCAGAATGACTCTTCAGGGAAATCATTTCAGGATTGGGTGAGCGAAATGGCTGCTTATGTGAAGTCCATTGATAACAATCATTTACTAGAAGTAGGAATTGAAGGATTTTATGGCGAATCAATGCCAGAAAAGAAGCAGTTTAATGCTGGAAATCAAGTTGGAACTGATTTCATTTCCAACAATCAAGTTCCCGAAATCGATTTCGCCGCCATCCATCTCTACCCTTATCAATGGGTGTCGAGCTCTGACGAAGCGGCTCAAAATGCTTTTGTTAACAAATGGGTAAAAGCTCATATTCAGGACTCAAATGATATTTTAGGAAAGCCCATTCTTCTTACTGAGTTTGGAAAGTCCTCAAGGTTATCAGGGTACAGTGTGGATAAAAGGAATAATTACTATAGGAAACTGTACAATATCATATACAGTAGCGCTAGCAATGGAGGCCCATGTGCTGGTGGGCTCTTTTGGCAACTACTGGCCCAAGGAATGAATGACACTCGTGATGGCTATGAAGTCATTTTCGAGGAAAGTCCTTCAACTACTAATGTCATCACCCAACAATCTTGGAGGCTGTCAAAGCTTGAATAG 1254 0.4083 MGFQNLVLTYFMLVMVVDQFGNCKVTIGPHNHSYKHLATKMIEDRGFIQRNGTRFVLNGKPHYLNGFNAYWLMIMASEASTMSKVTTIFQEASLHGLNVARTWAFNDRGYKALQISPGSYDENVFKGLDFVISEAGRCGVRLILVLVNNWKNLGGKSQYVEWARERGQQVKNDDEFFTHPIIKQYYKNHVKTVLTRKNTITGLAYKDDPTIFSWELINEPRSQNDSSGKSFQDWVSEMAAYVKSIDNNHLLEVGIEGFYGESMPEKKQFNAGNQVGTDFISNNQVPEIDFAAIHLYPYQWVSSSDEAAQNAFVNKWVKAHIQDSNDILGKPILLTEFGKSSRLSGYSVDKRNNYYRKLYNIIYSSASNGGPCAGGLFWQLLAQGMNDTRDGYEVIFEESPSTTNVITQQSWRLSKLE* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0640 417 Gene3D Glycosidases 43 417 - -
Apr4g0640 417 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 12 417 - -
Apr4g0640 417 PANTHER - 12 417 IPR045053 GO:0004553
Apr4g0640 417 SUPERFAMILY (Trans)glycosidases 47 405 IPR017853 -
Apr4g0640 417 Pfam Cellulase (glycosyl hydrolase family 5) 59 345 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0640 Apr-Chr4 5309482 5312477 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0640 46 417 Glycoside Hydrolase AT1G02310 55.937 9.42e-157 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0640 K19355 - gmx:100791612 649.818