Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0622 ATGGCAGACCAAGATGCAAAAGAAGAACACAAGCCCCTCAACCAATGGAAGAGAAGAAAAGGTGGATTCAGGGCTTCCATGTTTATTTTTGTCTTGTCAGCATTGGACAACATGGGTTTTGTGGCAAACATGGTGAGCTTAGTCCTATACTTTTATGGAGTGATGCACTTTGATCTGTCCAGTTCTGCCAACACTCTCACAAACTTCATGGGTTCAACTTTCTTGCTTTCCCTTGTTGGAGGCTTCATCTCAGATACCTACTTAAACAGATTCACCACATGCCTGGTTTTCGGATCACTCGAGGTTCTGGCCTTGGCAATGCTCACAGTTCAAGCTGCTTCCAACCACTTACACCCAAATGCTTGTGGCAAATCAAGCTGTGTGAAAGGTGGCATAGCAATGATGTTTTACACATCACTGTGCTTGTTGGCATTGGGAATGGGAGGGGTGAGAGGATCTATGACAGCATTTGGTGCTGACCAATTTGATGAAAAGGATCTAACCGAAGCAAAAGCTCTTGCAAGCTTTTTCAATTGGCTTTTGATGAGTTCAACCGTGGGAGCAATCACAGGAGTTACAGGTGTTGTGTGGGTTAGCACACAAAAAGCATGGCATTGGGGTTTTTTCATAATAACCATAGCTTCCTCTATTGGCTTTGTGACCCTTGCTCTTGGTAAGCCATTCTACCGCATCAAAACTCCAGGAGATAGCCCCACTTTGAGAATTGCTCAAGTTATTGCTGTGGCTTTTAAAAATCGAAAGCTGTCACTGCCGCAGTCACATGAAGAACTATATGAACTGAGTGATAAAGATGCTACAGTTGAGAAGATTGCGCACACCAACCAGATGAGGTTTCTAGATAAAGCGGCTATTATCCAAGAAAATTCAAAACCTCAAGCATGGAAGGTGTGCACAGTGACACAAGTGGAAGAAGTGAAGATCCTAACCAGGATGTTACCTATAGTGGCCAGTACCATTATACTGAACACTTGTATGGCTCAGCTTCAAACATTCTCGGTTCAACAAGGGAATGTGATGAACCTGAAACTTGGTTCTCTTACAGTGCCTGCACCATCTATTCCCGTCATCCCTCTTGTTTTCATAAGCGTCCTTGTTCCTATGTATGAGTTATTTTTTGTGCCATTTGCAAGAAAGATCACTCACCACCCTTCAGGCATCACACAACTTCAAAGGGTAGGAGTGGGATTAGTCCTCTCAGCAATATCAATGGCAGTGGCTGGGATTGTGGAAGTGAAAAGAAGGGATCAGGGGAGGAATGACCCCTTAAAGCCTATAAGTCTATTTTGGCTCTCATTTCAATATGGTATATTTGGAATTGCAGATATGTTCACACTCGTAGGACTACTGGAATTTTTTTACAGGGAATCACCTGCAAGCATGAAATCACTGTCTACATCTTTCACATGGTTGTCAATGTCTCTTGGCTACTTCTTGAGTACTGTCTTTGTCAATGTCATCAATGCAATTACCAAAAGGATCACCCCAAGTAAACAAGGTTGGTTGCATGGGTTTGACTTAAACCAAAATAACCTCAACCTGTTCTATTGGTTCCTAGCCACACTTAGTTGTCTTAATTTTTTTAACTACCTTTATTGGGCCTCACGGTACAAGTACAAATCTGAAGAGCGTAACTCAAGCCCAGATTTGAAGGCTTTAGCTGAAATGTCTCTGAAAACAAGAGTGAGGGAAGGGAACACACGTGAGTGA 1728 0.4277 MADQDAKEEHKPLNQWKRRKGGFRASMFIFVLSALDNMGFVANMVSLVLYFYGVMHFDLSSSANTLTNFMGSTFLLSLVGGFISDTYLNRFTTCLVFGSLEVLALAMLTVQAASNHLHPNACGKSSCVKGGIAMMFYTSLCLLALGMGGVRGSMTAFGADQFDEKDLTEAKALASFFNWLLMSSTVGAITGVTGVVWVSTQKAWHWGFFIITIASSIGFVTLALGKPFYRIKTPGDSPTLRIAQVIAVAFKNRKLSLPQSHEELYELSDKDATVEKIAHTNQMRFLDKAAIIQENSKPQAWKVCTVTQVEEVKILTRMLPIVASTIILNTCMAQLQTFSVQQGNVMNLKLGSLTVPAPSIPVIPLVFISVLVPMYELFFVPFARKITHHPSGITQLQRVGVGLVLSAISMAVAGIVEVKRRDQGRNDPLKPISLFWLSFQYGIFGIADMFTLVGLLEFFYRESPASMKSLSTSFTWLSMSLGYFLSTVFVNVINAITKRITPSKQGWLHGFDLNQNNLNLFYWFLATLSCLNFFNYLYWASRYKYKSEERNSSPDLKALAEMSLKTRVREGNTRE* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0622 575 Gene3D MFS general substrate transporter like domains 2 552 IPR036259 -
Apr4g0622 575 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 557 IPR000109 GO:0016020|GO:0022857|GO:0055085
Apr4g0622 575 Pfam POT family 91 506 IPR000109 GO:0016020|GO:0022857|GO:0055085
Apr4g0622 575 PANTHER PEPTIDE/NITRATE TRANSPORTER 10 557 - -
Apr4g0622 575 SUPERFAMILY MFS general substrate transporter 7 549 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0622 Apr-Chr4 5156078 5159005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0622 17 547 Organic Solute Cotransporters AT1G69850 42.376 6.68e-146 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0622 K14638 - aprc:113861407 1132.47