Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0614 ATGCTGCGTCTGAAAGCGTTTCGGCCTTCCGCTGATAAAATCGTTAAGATCCAATTGCACCCGACACATCCATGGATGGTCACAGCCGATGATTCAGATCGCGTCTCGGTTTGGAACTGGGAACACCGCCAGGTGATATATGAGTTGAAAGCTGGCGGAGTGGATGAGCGACGTTTGGTCGGCGCCAAGTTGGAGAAGCTGGCCGAGGGAGAAACAGAGTCCAAAGGGAAACCCACAGAAGCCATTCGTGGAGGAAGTGTTAAGCAGGTGAATTTTTATGATGATGATGTACGCTTTTGGCAACTTTGGCATAATCGCTCTGCAGCATCTGAGGCTCCAACAGCTGTCCATACTTCAGCTTTTAGCTCTCCTGCCCCATCAACAAAGGGAAGACATTTTCTTGTCATATGTTGTTTAAACAAAGCTATATTTTTGGACTTGGTGACAATGCGTGGCCGTGATGTACCAAAGCAAGAGCTCGATAACAAGTCCCTTTTATGCATGGAGTTCCTTTATAGAACCGGTGTTGGTGATGGTCCTCTTGTTGCTTTTGGTGCATCTGATGGTGTCATTAGAGTTCTCTCAATGATGACATGGAAGCTTGTGCGACGGTACACTGGAGGTCATAAAGGATCTATCACTTGCTTGATGTCCTTCATGGCTGCTTCTGGCGAGGCTCTTCTCGTTTCGGGCGCTAGTGATGGATTGCTCATAATTTGGAGTGCTGACCATGGACCAGATTCACGTGAACTTGTACCCAAGCTGAGTTTAAAAGCACATGATGGAGGGGTTGTAGCAGTTGAGCTGTCAAGGGTGATGGGAGGTGCTCCTCAGCTAATTACAATTGGTGCTGATAAGACATTAGCTATATGGGACACTGTCTCCTTTAAGGAGTTGCGTCGGATAAAGCCAGTTCCCAAATTTGCTTGCCACAGTGTGGCTTCTTGGTGTCATCCTCGAGCTCCAAACCTTGATATTCTAACCTGCGTCAAAGATTCTCACATATGGGCAATTGAACATCCCACTTATTCTGCTCTGACGAGGCCATTGTGTGAATTGACCTCAGTTATTCCTCCACAAGCTCTTGCTCCTAATAAGAAACTGAGGGTTTATTGTATGGTTGCACATACTTTGCAGCCACATCTTGTTGCTACTGGAACCAACATTGGTGTTATTATCTGCGAGTTTGATGCTAGATCTCTTCCACCTGTAGCTCCCCTACCAACTCCATCAGATAGTAGAGAGCATTCTGCCATATTTGTTATTGAAAGGGAGCTAAAGCTATTAAATTTTCAGCTAAACAATTCTGCAAATCCATCTCTTGGAAATAACAGCTCCTTGTCAGAAACAGGAAGACCCAAGGGAGATTTTTTTGAACCATTACCTGTCAAGCAGGGGAAGAAGCACATTAGTACACCTGTTCCACATGATTCATACTCAGTTCTTTCTGTGAGCAGTTCAGGAAAGTATCTAGCAATTGTTTGGCCAGATATTCCTTATTTCTCTATCTACAAGGTGAGTGATTGGTCGATTGTTGACTCTGGAAGTGCAAGGCTTCTCGCTTGGGATACTTGTCGTGACAGATTTGCTATATTGGAATCAGCATTACCTCCTAGAATTCCTATAATTCCGAAGGGTAGTTCATCAAAAAGAGCAAAAGAAGCTGCTGCAGCACAAGCAGCAGCAGCAGCTGCTGCTGCTGCTTCCACAGCTTCTGTTCAAGTTCGCATCTTGTTAGATGATGGAACATCAAATATACTAATGAGGTCTGTTGGTGCCCGCAATGAACCAGTCATTGGTTTGCATGGAGGGGCACTGCTTGGCGTTGCCTATCGAACATCTAGGAGAGTCAGTCCTATTGCTGCTACAGCTATTTCAACAATCCAGTCCATGCCCTTGTCAGGTTATGGAAGCAGTGGTCTTTCTTCTTTTACTACCTATGATGATGGGTTTTCTTCACATAGATCTCCAGCTGAGGCAGCACCTCAAAACTTCCAGCTATACAGTTGGGAGACATTCCAGCCTGTTGGGGGTCTACTTCCTCAGCCAGAATGGACTGCTTGGGACCAAACCGTTGAGTTCTGTGCATTTGCGTACCAGCAATACTTGGTCATATCTTCTTTGCGCCCTCAATATAGATACCTGGGAGATGTTGCAATCCCATATGCTACTAGTGCTGTTTGGCACCGGAGGCAACTGTTTGTGGCTACACCAACTACTATAGAAATTGTTTTTGTGGATGCTGGGGTTGCTCAAATTGACATTGAAACTAAGAAGTTGAAAGAAGAGCAGAAAATGAAAGAAGTACAGGAAAGAGCAGTTGCAGAGCATGGAGAGTTAGCACTAATTACAGTAGAAGGCCCCCAATCAGCTGCCGAAGAAAGAATAACATTGAGGCCACCAATGTTGCAGGTGGTTCGATTGGCTTCATTTCAGCATGCTCCCTCGGTCCCACCTTTCTTAACATTACCAAAACAGTCTAGAGTTGATGCTGATGACTCTTGGATGGCAAAAGAAGCAGAAGAGAGAAAAGCAAGTGAGGTGGCTGTTGGCGGGGGTGGAGTGGCTGTGGCAGTTACTCGTTTTCCAATGGAGCAGAAACGTCCAGTTGGGCCTCTTGTGGTTGTAGGTGTCAGGGATGGAGTTCTTTGGTTAATTGACAGGTACATGTGTGCGCATGCTTTATCCTTGAGTCATCCTGGTATTCGTTGTCGATGTCTTGCTGCTTACGGTGATGCTGTTAGTGCAGTAAAATGGGCAAGTAGGCTTGGAAGAGAACACCACGATGATTTAGCACAATTTATGCTAGGAATGGGCTATGCCACTGAAGCACTTCATTTGCCTGGAATATCTAAGAGGTTGGAGTTTGATTTGGCAATGAAGAGTAATGATTTGAAGAGAGCTCTTCAATGTCTTCTTACCATGAGTAATAGTAGGGATATAGGACATGATGGTACTGGGCTTGGTTTGAATGACATTCTTAACTTATCAGAAAAAAAACAAGATACAGTTAAAAAACAAGATATAGTTGAAGGCGTTCAGGGTATAGTGAAATTTGCAAGAGAGTTTTTGGATCTTATTGACGCTGCAGATGCTACAGCACAGGGTGAAATTGCCCGTGAAGCTCTCAAGAGGTTAGCTGCAGCAGGTTCGGTGAAAGGTGCTTTACAAGGTCATGAGTTGAGAGGATTGGCATTACGCCTTGCTAATCATGGAGAGTTGACTCGGCTAAGTGGTTTGGTTAACAACTTAATCACGCTTGGCTTGGGACGGGAAGGTGCATTTGCTGCTGCTGTTTTGGGCGACAATGCTTTGATGGAGAAAGCATGGCAAGATACTGGAATGCTGGCAGAGGCTGTGCTTCATGCTCATGCACATGGACGTCCAACTTTGAAGAACTTAGTGCAGGCTTGGAACCAAATGCTACAGAGAGAGATTGAACCTACTCCATCACAGAAGACAGATGCTACAGCTGCATTTCTGGCTTCTCTTGAGGAGCCTAAGCTTACAAGTTTGGCAGAAGCAGGGAAGAAACCACCTATTGAAATCCTGCCTCCAGGGATGATGTCTCTTGATGCTCCCATGTCCATCCAGAAAAAACCAGCTTCTGCTGCTCAGACTTCCCAACAACCACCAGGCAAGCCATTGGCACTGGAAGCACCTCCTACTACAACCACAGTTGCCCCAGAGAATGCTACACAGCAGCCTGAATCCACACCTGCACCAGTTAGTGATCCACTTTCATCACAGTCTACATCAGACTCCACACCAGTTCCTGTGGCTGCTCCACCTCAACCAGAATCAGGTGAAACTACAGTGGAGGATGGAGTTTCTACCTCTGCGCCAGTTAGTGACAGAGATCCAAATGTTAATGGCGAAACTGTCCAAGCAGAGTCTACAGGCAATCCAGCACCACCTGAGGTCCCCCCATCACCAGTAGCAGAGGTTTTGGACACTGCTGTTCCAAGTCCAACAACAATACCTGTGAGTGATCCCCTTATATGA 4005 0.4587 MLRLKAFRPSADKIVKIQLHPTHPWMVTADDSDRVSVWNWEHRQVIYELKAGGVDERRLVGAKLEKLAEGETESKGKPTEAIRGGSVKQVNFYDDDVRFWQLWHNRSAASEAPTAVHTSAFSSPAPSTKGRHFLVICCLNKAIFLDLVTMRGRDVPKQELDNKSLLCMEFLYRTGVGDGPLVAFGASDGVIRVLSMMTWKLVRRYTGGHKGSITCLMSFMAASGEALLVSGASDGLLIIWSADHGPDSRELVPKLSLKAHDGGVVAVELSRVMGGAPQLITIGADKTLAIWDTVSFKELRRIKPVPKFACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTSVIPPQALAPNKKLRVYCMVAHTLQPHLVATGTNIGVIICEFDARSLPPVAPLPTPSDSREHSAIFVIERELKLLNFQLNNSANPSLGNNSSLSETGRPKGDFFEPLPVKQGKKHISTPVPHDSYSVLSVSSSGKYLAIVWPDIPYFSIYKVSDWSIVDSGSARLLAWDTCRDRFAILESALPPRIPIIPKGSSSKRAKEAAAAQAAAAAAAAASTASVQVRILLDDGTSNILMRSVGARNEPVIGLHGGALLGVAYRTSRRVSPIAATAISTIQSMPLSGYGSSGLSSFTTYDDGFSSHRSPAEAAPQNFQLYSWETFQPVGGLLPQPEWTAWDQTVEFCAFAYQQYLVISSLRPQYRYLGDVAIPYATSAVWHRRQLFVATPTTIEIVFVDAGVAQIDIETKKLKEEQKMKEVQERAVAEHGELALITVEGPQSAAEERITLRPPMLQVVRLASFQHAPSVPPFLTLPKQSRVDADDSWMAKEAEERKASEVAVGGGGVAVAVTRFPMEQKRPVGPLVVVGVRDGVLWLIDRYMCAHALSLSHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYATEALHLPGISKRLEFDLAMKSNDLKRALQCLLTMSNSRDIGHDGTGLGLNDILNLSEKKQDTVKKQDIVEGVQGIVKFAREFLDLIDAADATAQGEIAREALKRLAAAGSVKGALQGHELRGLALRLANHGELTRLSGLVNNLITLGLGREGAFAAAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVQAWNQMLQREIEPTPSQKTDATAAFLASLEEPKLTSLAEAGKKPPIEILPPGMMSLDAPMSIQKKPASAAQTSQQPPGKPLALEAPPTTTTVAPENATQQPESTPAPVSDPLSSQSTSDSTPVPVAAPPQPESGETTVEDGVSTSAPVSDRDPNVNGETVQAESTGNPAPPEVPPSPVAEVLDTAVPSPTTIPVSDPLI* 1335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0614 1334 SUPERFAMILY WD40 repeat-like 11 497 IPR036322 GO:0005515
Apr4g0614 1334 MobiDBLite consensus disorder prediction 1271 1301 - -
Apr4g0614 1334 Gene3D - 905 1159 - -
Apr4g0614 1334 ProSiteProfiles Trp-Asp (WD) repeats profile. 257 301 IPR001680 GO:0005515
Apr4g0614 1334 PANTHER TSET COMPLEX MEMBER TSTF 1 1278 - -
Apr4g0614 1334 MobiDBLite consensus disorder prediction 1171 1314 - -
Apr4g0614 1334 MobiDBLite consensus disorder prediction 1224 1258 - -
Apr4g0614 1334 PANTHER BNAC07G49640D PROTEIN 1 1278 - -
Apr4g0614 1334 Gene3D - 3 350 IPR015943 GO:0005515
Apr4g0614 1334 SMART WD40_4 198 241 IPR001680 GO:0005515
Apr4g0614 1334 SMART WD40_4 250 292 IPR001680 GO:0005515
Apr4g0614 1334 SMART WD40_4 1 39 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0614 - - gmx:100786844 2363.57