Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0612 ATGTCGATAATACCGAAGGAACCAGAGCAGGTGATGAAGATGAGAGGAGGAAGTGTGTTAGGGAAGAAAACCATTCTTAAGAGCGACCATTTTCCTGGTTGCCAGAACAAGCGTTTGTCTCCTCAGATCGAAGGCGCTCCCAATTATCGACAGGCTTCCGATTCGTTACATGTTCACGGTGTTGCCATTCCGACAATCGATGGAATTCGAAATGTTCTCAACCACATTGGTGCTCAATTTCATGTTCTTTGGATTAGTCTTCGTGAGGAACCGCTTGCTTACATTAATGGTCGCCCCTTTGTTTTGCGTGATGTGGAGAGACCCTTCTCCAACCTTGAGTATACGGGGATTAATAGGGAACGGGTTGAACAAATGGAAGCTCGTTTGAAAGAAGACATTATGATGGAAGCTGCAAGATATGGAAACAAGATCCTTGTGACTGATGAACTGCCAGATGGTCAAATGGTGGACCAATGGGAACCGGTGTCGTGTAATTCTGTGAAGACGCCTCTAGAGGTGTACGAAGAATTGCAGGTGGAGGGATATCTTGTTGATTATGAACGTGTTCCTATAACTGATGAAAAATCACCGAAGGAATTGGATTTTGATATTTTGGTTCATAAAATTTCTCAAGCTAATGTAAATACAGAGATAATTTTTAATTGTCAAATGGGGCGTGGACGAACTACAACTGGAATGGTCATTGCAACTTTGTTTTACCTCAATCGAATAGGAGCCTCTGAAGAGTCAATTCGCAGGGGAGAATATGCAGTCATAAGAAGCTTGATTCGAGTGTTAGAGGGTGGTGTTGAGGGGAAAAGACAAGTGGACAAAGTCATTGACAAGTGTGCTTCAATGCAGAATCTACGTGAAGCAATCGCTACATATCGCAATAGCATTCTGCGACAACCAGATGAGATGAAAAGGGAGGCATCACTATCCTTTTTTGTGGAGTACCTGGAAAGATACTACTTTTTAATATGTTTTGCTGTGTACATTCATTCAGAAAGGGCTGCACTTCATTCTAATACAGCTGGTGACTGTAGCTTTGCTGAATGGATGAGAGCAAGGCCTGAACTCTACAGTATTATTCGCAGGTTACTCAGGAGAGATCCAATGGGTGCACTTGGATATTCAAGTCTGAAACCATCTCTAAAGAAGATAGCTGAATCTACTGATGGTCGCCCTTTTGATATGGGTGTGGTTGCTGCCATGAGAAATGGCGAGGTTCTTGGTAGTCAAACTGTTCTAAAAAGTGATCACTGTCCTGGATGTCAAAATCCAACTTTACCCGAGAGAGTAGATGGTGCTCCTAATTTTCGAGAAGTTCCTGGATTTCCAGTTTATGGGGTAGCAAATCCAACCATTGATGGTATCCGATCTGTCATTCGTAGGATTGGTAGCTCTAACGGTGGGCGCCCTATACTTTGGCATAATATGAGAGAAGAGCCTGTTATTTACATCAATGGGAAGCCATTTGTTCTTCGTGAAGTTGAAAGACCATACAAAAACATGTTGGAGTACACGGGTATTGACCGTGAACGAGTGGAGAAAATGGAAGCTCGATTAAAAGAAGATATCCTACGTGAAGCTAAACACTACGGCAGTGCCATAATGGTAATTCATGAAACAGATGATAAGCAGATATTTGATGCTTGGGAGCATGTTACATCTGATGTGATTCAAACCCCACTTGAAGTTTTCAGAAGCTTGGAAGCTGAGGGTTTCCCCATTAAGTATGCGCGTGTGCCCATCACTGATGGAAAAGCTCCTAAAAGTTCTGACTTCGACACTTTGGCAACTAATATTGCTTCTGCAGCAAAGGACGCTGCATTTGTTTTCAATTGTCAGATGGGTAGGGGCAGGACAAGCACTGGTACTGTCATAGCTTGCCTTGTGAAACTTCGAATTGATTATGGTAGGCCCATTAAGACACTGAATGATGTTGTGACCCATGAGGAATCAGATTGTGGTTCTTCAAGTGGAGACGAAGCAGGGGGTGATGTCACAGCATTAACCTCCAATACTTCTCAAGTAGAGGCAGATGAGAAACAAAATCATGTTTTTCGTATAAACGACATCCTCTTGTTATGGAAGATAACAACATTATTTGATAATGGTGTTGAATGCCGAGAGGTCTTAGATGATATTATTAATAGATGTTCAGCACTTCAAAACATTCGTCAAGCTGTCTTAAAATATAGAAAAGTATTCAATCAGCAACATGTTGAGCCTAGGGTAAGGAGGGTGGCATTAAATCGTGGTGCTGAGTACTTGGAGCGGTACTTTCGTCTAATTGCTTTTGCAGCGTATCTTGGAAGTGAAGCATTTGATGGGTTTTGTGGACAAGGAGAATCTAAAATGACATTCAAGGTTTGGTTGCATCAGAGGTCAGAGGTGCAGGCTATGAAATGGAGCATCAGATTAAGACCAGGGCGATTTTTCACTGTCCCTGAAAAGTTGCGAGAACCACAAGAGTCTCAGCATGGAGATGCAGTGATGGAGGCCATTGTCAAGGCCCGGAACGGTTCTGTTTTGGGGAAAGGCTCCATACTGAAAATGTATTTCTTTCCTGGTCAGAGAACTTCCAGTCACATACAAATTCATGGTGCACCTCATGTTTACAAGGTTGATGAATACCCGGTGTATTGCATGGCAACTCCAACCATTTCTGGTGCCAAGGAGATGCTAGATTATTTGGACGCTCAGCCTAAACCTGCTTTCACTACTCAAAAAGTAATATTGACTGATTTGAGAGAAGAAGCAGTTGTTTATATAAATAATACTCCCTTTGTCCTCAGGGAATTAAACAAACCAGTTAATACACTCAAATACGTGGGAATCACTGGACCTGTGGTGGAACACATGGAAGCTCGGCTGAAAGAAGATATATTATCTGAGATTAGACATTCTGGGGGGCGAATGCTATTACACCGTGAAGAATATAACCCTTCAACAAATCAGTCTGATGTGGTTGGATACTGGGAAAACATTCGGGCAGATGATGTGAAGACACCAGCAGAAGTTTATTCTTCCCTGAAAGATGATGGATATGATATTGTCTATCGGAGGATTCCTTTAACAAGAGAAAGAAATGCTTTGGCTTCTGATGTTGATGCAATACAGCGATGTCAAGACAATTCTGCAGGGAGTTACCTTTTTGTGTCACACACAGGTTTTGGTGGAGTTGCATATGCAATGGCCATCATCTGCATCAGACTCAGTGCAGGATCCAAAGTCCAACAGCCATCATATGATCCTCATATACATGCTGTGACTGAAGAGAACGTGCCCTCTCATGCTTCTAATGAAACAGCACTTAGGATGGGTGACTACCGTGACATTTTGAACCTCACAAGAGTCCTCATACACGGTCCGCAAAGCAAAGCAGATGTTGACATTGTCATTGAAAGATGTGGTGGAGCGGGGCATATTCAAGATGATATTCTTTATTACAATAGAGAACTCGAGAAAAATACCAATGATGGTGATGAAGAACGTGCATACCTTACGGACATGGGCATAAAGGCTTTGAGGCGATATTTTTTCCTTATCACATTCAGATCTTATCTCTATTGCACCTCTCCAGCCAATATGGAATTTGCTGCGTGGATGGATGCAAGACCAGAGCTGGATCATCTATGTAACAATCTAAGAATTGATAAATAA 3669 0.4227 MSIIPKEPEQVMKMRGGSVLGKKTILKSDHFPGCQNKRLSPQIEGAPNYRQASDSLHVHGVAIPTIDGIRNVLNHIGAQFHVLWISLREEPLAYINGRPFVLRDVERPFSNLEYTGINRERVEQMEARLKEDIMMEAARYGNKILVTDELPDGQMVDQWEPVSCNSVKTPLEVYEELQVEGYLVDYERVPITDEKSPKELDFDILVHKISQANVNTEIIFNCQMGRGRTTTGMVIATLFYLNRIGASEESIRRGEYAVIRSLIRVLEGGVEGKRQVDKVIDKCASMQNLREAIATYRNSILRQPDEMKREASLSFFVEYLERYYFLICFAVYIHSERAALHSNTAGDCSFAEWMRARPELYSIIRRLLRRDPMGALGYSSLKPSLKKIAESTDGRPFDMGVVAAMRNGEVLGSQTVLKSDHCPGCQNPTLPERVDGAPNFREVPGFPVYGVANPTIDGIRSVIRRIGSSNGGRPILWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIDRERVEKMEARLKEDILREAKHYGSAIMVIHETDDKQIFDAWEHVTSDVIQTPLEVFRSLEAEGFPIKYARVPITDGKAPKSSDFDTLATNIASAAKDAAFVFNCQMGRGRTSTGTVIACLVKLRIDYGRPIKTLNDVVTHEESDCGSSSGDEAGGDVTALTSNTSQVEADEKQNHVFRINDILLLWKITTLFDNGVECREVLDDIINRCSALQNIRQAVLKYRKVFNQQHVEPRVRRVALNRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGESKMTFKVWLHQRSEVQAMKWSIRLRPGRFFTVPEKLREPQESQHGDAVMEAIVKARNGSVLGKGSILKMYFFPGQRTSSHIQIHGAPHVYKVDEYPVYCMATPTISGAKEMLDYLDAQPKPAFTTQKVILTDLREEAVVYINNTPFVLRELNKPVNTLKYVGITGPVVEHMEARLKEDILSEIRHSGGRMLLHREEYNPSTNQSDVVGYWENIRADDVKTPAEVYSSLKDDGYDIVYRRIPLTRERNALASDVDAIQRCQDNSAGSYLFVSHTGFGGVAYAMAIICIRLSAGSKVQQPSYDPHIHAVTEENVPSHASNETALRMGDYRDILNLTRVLIHGPQSKADVDIVIERCGGAGHIQDDILYYNRELEKNTNDGDEERAYLTDMGIKALRRYFFLITFRSYLYCTSPANMEFAAWMDARPELDHLCNNLRIDK* 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0612 1222 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 836 1064 IPR029021 -
Apr4g0612 1222 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 401 636 IPR029021 -
Apr4g0612 1222 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 1 311 - -
Apr4g0612 1222 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 402 576 - -
Apr4g0612 1222 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 315 456 - -
Apr4g0612 1222 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 575 1222 - -
Apr4g0612 1222 PANTHER METAL ION-BINDING PROTEIN 402 576 - -
Apr4g0612 1222 PANTHER METAL ION-BINDING PROTEIN 1 311 - -
Apr4g0612 1222 PANTHER METAL ION-BINDING PROTEIN 315 456 - -
Apr4g0612 1222 PANTHER METAL ION-BINDING PROTEIN 575 1222 - -
Apr4g0612 1222 CDD PTP_paladin 15 283 - -
Apr4g0612 1222 SMART PTPlike_phytase_2 85 240 - -
Apr4g0612 1222 SMART PTPlike_phytase_2 916 1074 - -
Apr4g0612 1222 SMART PTPlike_phytase_2 478 634 - -
Apr4g0612 1222 Pfam Inositol hexakisphosphate 478 634 - -
Apr4g0612 1222 Pfam Inositol hexakisphosphate 85 239 - -
Apr4g0612 1222 Pfam Inositol hexakisphosphate 917 1072 - -
Apr4g0612 1222 Gene3D Protein tyrosine phosphatase superfamily 853 1094 IPR029021 -
Apr4g0612 1222 Gene3D Protein tyrosine phosphatase superfamily 416 656 IPR029021 -
Apr4g0612 1222 Gene3D Protein tyrosine phosphatase superfamily 24 261 IPR029021 -
Apr4g0612 1222 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 9 334 IPR029021 -
Apr4g0612 1222 CDD PTP_paladin 406 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0612 Apr-Chr4 5067239 5077587 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0612 - - gmx:100788460 2240.69