Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0610 ATGGGTTGGAGTGGATGTCACAAAAACCTAATCTCGATGACCGCTTTTACAGTGGCCTTGGTTTTCGTTCAACATGTGAAGTGTGAGGAGGTTCACGACTCAGACCGCATATCACTTGAGCAGGGTGGCTTCGTTCAACGAAGGGGCACCAATTTCATTCTGAATAACAAGCGTTTCTACTTCAATGGATTCAATGCTTATTGGTTAATGTACATGGCATCTGACCCATCCACAAGGTCCAAAGTCACTGGCATTTTACAACAAGCTTCTAACCATGGTTTAACTGTTGCAAGAACTTGGGCTTTTAATGATGGAGCGTACAGAGCCCTTCAGGTTTCTCTCGGTTCCTATGACGAGAAAGTATTCAGGGGACTGGACTTTGTAATATCAGAAGCAGGAAAATATGGTGTACGATTGATACTGAGTTTGGTGAACAATTGGAAAGATTTTGGAGGGAAAAACCAGTATGTCCAATGGGTAAGGGAACATGGCGGGTACGTGAACAGCGAAGATGACTTCTTTACGCACCCCGTTGTTAGGCAACACTACAAAAACCATATTAAGGCTGTGCTGACAAGAAAAAACTCTATAACTGGGGTGGTATATAAGGACGATCCTGCCATTTTTGCTTGGGAACTTATGAACGAACCACGTTCCCAACACGACAACTCCGGAAAAATTATTCAGGAATGGGTGACTGAGATGGCTGCCTACGTCAAATCCATTGATAGAATTCATTTGCTGGAAATAGGACTCGAAGGGTTCTATGGTGAAACAATACCAGAAAAAAAACAAATCAATCCTGGATACCAACTTATTGGTACTGATTTCATATCTAACAACCGAGTTCCCCATGTCGATTTTGCCACTATCCATCTTTACCCTGAACAATGGTTGCCAGGCTCAAGCGAAGCTGCTCAAAATGCATTTGTTGACAAATGGGTACAAGAACATATTAAAGATGCCAAAAATGTTCTGGGGAAGCCTATTGTTGTTGGTGAGTTTGGCAAGTCTTCAAAGTTGTATAACGTGGAAGAAAGGGACAATTACATGAGAAAATTGTACAGTGCCATATATAATAGCGCCAGTAGTGGGGGACCCTGTGCTGGTGGGCTTTTTTGGCAACTCATGGCTCAAGGAATGGATGGTTTACGAGATGGTTATGAAATAATCTTCGAGGAGAGTCCTTCAACTACCACAATTATAGATCAGCAATCTCGCAAAATGTCAAGTCTTGCTTAG 1242 0.4243 MGWSGCHKNLISMTAFTVALVFVQHVKCEEVHDSDRISLEQGGFVQRRGTNFILNNKRFYFNGFNAYWLMYMASDPSTRSKVTGILQQASNHGLTVARTWAFNDGAYRALQVSLGSYDEKVFRGLDFVISEAGKYGVRLILSLVNNWKDFGGKNQYVQWVREHGGYVNSEDDFFTHPVVRQHYKNHIKAVLTRKNSITGVVYKDDPAIFAWELMNEPRSQHDNSGKIIQEWVTEMAAYVKSIDRIHLLEIGLEGFYGETIPEKKQINPGYQLIGTDFISNNRVPHVDFATIHLYPEQWLPGSSEAAQNAFVDKWVQEHIKDAKNVLGKPIVVGEFGKSSKLYNVEERDNYMRKLYSAIYNSASSGGPCAGGLFWQLMAQGMDGLRDGYEIIFEESPSTTTIIDQQSRKMSSLA* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0610 413 Pfam Cellulase (glycosyl hydrolase family 5) 61 355 IPR001547 GO:0004553|GO:0071704
Apr4g0610 413 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 15 412 - -
Apr4g0610 413 SUPERFAMILY (Trans)glycosidases 44 403 IPR017853 -
Apr4g0610 413 Gene3D Glycosidases 40 413 - -
Apr4g0610 413 PANTHER - 15 412 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0610 Apr-Chr4 5053794 5057568 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0610 11 410 Glycoside Hydrolase AT5G66460 55.970 1.26e-159 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0610 K19355 - gmx:100787923 717.998