Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0579 ATGGATTCAGCGAATGGAGCAATGGTGGAAATGGAAGTGGAGAGATTAAGCGAATGGCGCGTGAATCGTGGCCCCTACCTCGGAGACATTTCAGCACTCTGTTTTCTTCATCTTCCCAATCACTCTCTTCCTTTTCTGCTCGCTGGTTTGGGTTCGGAAATTCTTCTCTACAACTTAGAACTCGTTAAGATCGTGAAATCATTCTCCGTATTCGAAGGAGTTCGCGTGCACGGAATTGTTTCTAGCTCGCCACAAGAAACCAATGCCTCTGTAACCGTAATTGCCGTGTTTGGGGAGACAAGAGTTAAGCTATTTAGCTTCGCTTTTGATAGGGTTTCTAAGAGCCCACAGTTAACGCTGATTCATTTGTTGCCAAAGTTTGGTCACTGGGTTTTGGATGTTTGCTTCCTCAAGGGATGCTTGCCTCATTCCAATGTGGAGAGCCAGTTTCTTGCTGTAGGATGTAGTGATAATTCAGTTCATGTTTGGGACGCATGTAATTCTAATACGGTTCTTAAGGTTCAATCTCCAGTACGGTGCCTTCTGTACTCAATGCGATTATGGGGTCGCAATCTTGAAGTTCTCCGTATTGCATCTGGTACAATATTCAATGAGATTATTGTTTGGAAAGTGGCCCCTCAACACAATAAATCTTCAAGAAGCCGAGAAGACCAAGATTGTTGGAGTATTTCATCCTCCAATTTCTGCCAACTAAAAGATCAACTGTATGAGGCTGTTCATGTATGTAAACTTGTTGGACATGAAGGTTCAATTTTCCGAATAGCATGGTCATCTTGTGGAGCTAAACTGGTATCTGTCTCTGATGACCGGAGTGCACGTGTCTGGGCTGTTCCTATTGAAAGGGAACATTCATTGTGTCATGATCCCATTGCCCTTGTTTTATTTGGACATAATGCTCGAGTTTGGGACTGCTGTATTTCTGATTTTTTGATTGTCACTGTCAGTGAGGATTGTACATGTCGTATATGGGGAGTTGATGGTAAACAACTGCAAGTCATCAAGGAGCACATTGGAAGGGGTATATGGAGATGTTTGTATGATCCAAATTCATCTCTTCTTATTACTGCTGGGTTTGACTCTGCTATTAAAGTACATCGACCTTATGCTTCTCTGTCTAAGAGCTTGGAAGCAGCACAAGAGTCCCCTGACAGGACAGAGATGTTTTCCATTTGCATCCCCAATGTGGTGGAGCATTTTGGATTTATGGACAGCAAGAGTGAATATGTTCGTTGTATGCGCTTTTCCTGTCAGGATTCTCTTTATGTTGCTACCAATCATGGTTATCTCTATCATGCTAAATTATGTGATGCTGGAGGTGTTCAGTGGAATCAACTTGTTCAGGTCAGCAATGGGGCACCAATTATCTGTATGGATTTATTAACCAAGGACTCATTTGAAATTGACTGTGGTGCTGAGGATTGGATGGCTATTGGAGATGGTAAAGGAAATATGACAATTGTTAGAGTTACTAATGCTGCTTGTAATCCTACAGTGAGATTGAGCTTTACTTGGCCAGCTGAAATGGAGAGACAGCTCTTGGGTACTTCTTGGTGTAAATCCATGGGCTGTAGGTATGTCTTTACAGCTGATCCTAGAGCAACATTGAAACTCTGGAGGTTGCCTGATACTTCACAACCTGATCTTCAGAGCTCAACAAGGAGTAATAATGTGTCACTTATAGCAGAGTTCATATCAAATTATGGAATGAGGATAATGTGCTTGGACATATGCATGGAGGAAGAGGTCCTGGCATGTGGAGATCTACGTGGTAATGTGATTCTGTTCCCTTTGCTAAAAGATCTGGTGGCAGACACATCTGCTTCACATGAAATGAAGATACCTCCAGTTAGTCATTTCAAAGGAGTTCATGGGATTTCAAGTGTCTCCAGTGTTTCTGTGACTAGGCTTGGTTATAATCAGATTGAGATATGCTCAACTGGAGCAGATGGTTGTATATGCTATCTTGAATATGATAAAGAAACACAAAATTTGCAATTTACGGGGATGAAACAAGTGAAGGAGTTGACTTTGATTGAACATGTAATGGATAACGACTCTGTTGATAGATCATCTAGCAGATATGCAGCTGGTTTTGCATCTGTAGATTTCATAGTTTGGAACTTAGTTAACGAGAATAAGGTGGTGAACGTTCCATGTGGCGGATGGCGGCGTCCTCATTCATATTATCTAGGTGATATACCAGAGATGAAGAATTGCTTTGCCTTTGTCAAGGATGAAATGATACATATACATAGACACTGGATTTATGATATAGATGGGAAGATATACCCTCAGAGTTTGCATATGCAGTTCCATGGAAGAGAGATACATTCCCTGTGCTTTATCTCCAATGATGTACTTATTGGAGATAGTTATAAATGTACCTTATTTTCTAAATCAAGTTGGATTGCCACTGGCTGTGAAGATGGAACTGTGAGGTTGACTTGGTATTCTCCAGGTGTTGAAAATTGGTCCACGTCAAAATTGCTTGGTGAACATGTTGGAGGATCGGCAGTCAGATCAATTTGTTGTGTGTCAAAAGCACACACCATTTCATTAGACATGGGTGATGGTGATGCACCTGATGGGGGTAGTGAACTGAATGCTGGTCTTGAAAACAAAGATAATCCAACATTACTGATATCAGTGGGTGCAAAGCGTGTCTTAACTTCTTGGCTACTCAAACATAGGAGGCTGGACAACAAAGGTGATTTACCAACTGATCATCAATACAAGTCACAAGGATTTGATGATAAACTTTTGTCAAATTTGTCCTCATCAATGACATTCCAGTGGCTTTCCACTGATATGCCAGCCAAGTATTCAATTACACCCAAAATTCCAGAAAATAATTTGGAAAAACTTGGGGTCGCTGAAAATGTTTCTAATACAAACATTGATGATAGACCGGGATCACTCATTTCTGAAAGTGGAATAACAAACTTGATCAGAGATAAACATGAAGATGACTGGAGATATCTTGCAGTCACTGCTTTTCTTGTTAAATGTTCTGGTTCCAGGTTATCTGTCTGTTTTGTTGTTGTTGCATGTTCAGATGCTACTCTTATGTTACGGGCTTTAATTTTGCCCTTTCGATTGTGGTTTGATGTCGCTTTACTGGTTCCTTTATTGGCACCTGTTTTGTCATTGCAGCATATCATCTTTCCCATACATAGGCCTTCCAAAGAAATCATCCAAAATGATAATGTTTATATTGTGATTAGTGGCTCTACCGATGGAAGTGTTGCTTTCTGGGACCTAACTGATAGTGTTGAGTCTTTCATGAAGCGAGTTTCAGTTTTTAATGTAGAGAAGTTTTTTGATTGTCAAAAACGGCCACGCACTGGGAGAGGAAGTCAGGGTGGTAGACGCTGGAGATCTTTGAGCAATAGCTTGTCAAAGAAAAGACAAGACAGTCTTCTGGTCACCTCAAAAGCCAAGGACAAGACCAAAAACATCGTTTGTGCTACACAGGGGACTTCATACATACCAAGTGATTCTGAAGATTGCAAGATGGTTTGTTCTCAATCCACACATGTACCTTACTCCAAGCTAGAAATCAAGACTGATAATTCATCGGTGGAAATATGTGAAATACAGCCTCTACACCTTTTGCAAAATACTCACCAATCTGGGGTCAACTGTCTCCATGTTTCAGAGATAAAGGGTGGCCAAAATACTGATAGTTGTCATGTGTACAGTATAATTAGTGGGGGTGATGATCAAGCACTTCATCATCTCATAGTTGAATTATCATCTAAATCAAAATGTTTAAATGATGGGATTTTGACCCCCGATTTGGTCCCTAAACCTGAATATGGGAAGGGCATCGATTTTCAAAGCCAGAGCAAGAATTGTGAGATAAGATTCTTAAATTATGAAAAATTACTCTCTGCTCACAGCTCTTCTGTCAAAGGTGTCTGGACAGATGGATCTTGGGTGTTTTCGACTGGACTTGATCAGAGGGTCAGATGCTGGCATCTTCAGCGGAGCAAACTAATTGAGCATTCACATCTAATAGTTAGTGTGCCAGAGCCAGAAACGTTATCTGCTAGGGCATGTGGCAGGAACCATTATCAGATTTGTGTTGCTGGAAGAGGGATGCAAATAATTGACTTTTCTGGATCCTGA 4152 0.4092 MDSANGAMVEMEVERLSEWRVNRGPYLGDISALCFLHLPNHSLPFLLAGLGSEILLYNLELVKIVKSFSVFEGVRVHGIVSSSPQETNASVTVIAVFGETRVKLFSFAFDRVSKSPQLTLIHLLPKFGHWVLDVCFLKGCLPHSNVESQFLAVGCSDNSVHVWDACNSNTVLKVQSPVRCLLYSMRLWGRNLEVLRIASGTIFNEIIVWKVAPQHNKSSRSREDQDCWSISSSNFCQLKDQLYEAVHVCKLVGHEGSIFRIAWSSCGAKLVSVSDDRSARVWAVPIEREHSLCHDPIALVLFGHNARVWDCCISDFLIVTVSEDCTCRIWGVDGKQLQVIKEHIGRGIWRCLYDPNSSLLITAGFDSAIKVHRPYASLSKSLEAAQESPDRTEMFSICIPNVVEHFGFMDSKSEYVRCMRFSCQDSLYVATNHGYLYHAKLCDAGGVQWNQLVQVSNGAPIICMDLLTKDSFEIDCGAEDWMAIGDGKGNMTIVRVTNAACNPTVRLSFTWPAEMERQLLGTSWCKSMGCRYVFTADPRATLKLWRLPDTSQPDLQSSTRSNNVSLIAEFISNYGMRIMCLDICMEEEVLACGDLRGNVILFPLLKDLVADTSASHEMKIPPVSHFKGVHGISSVSSVSVTRLGYNQIEICSTGADGCICYLEYDKETQNLQFTGMKQVKELTLIEHVMDNDSVDRSSSRYAAGFASVDFIVWNLVNENKVVNVPCGGWRRPHSYYLGDIPEMKNCFAFVKDEMIHIHRHWIYDIDGKIYPQSLHMQFHGREIHSLCFISNDVLIGDSYKCTLFSKSSWIATGCEDGTVRLTWYSPGVENWSTSKLLGEHVGGSAVRSICCVSKAHTISLDMGDGDAPDGGSELNAGLENKDNPTLLISVGAKRVLTSWLLKHRRLDNKGDLPTDHQYKSQGFDDKLLSNLSSSMTFQWLSTDMPAKYSITPKIPENNLEKLGVAENVSNTNIDDRPGSLISESGITNLIRDKHEDDWRYLAVTAFLVKCSGSRLSVCFVVVACSDATLMLRALILPFRLWFDVALLVPLLAPVLSLQHIIFPIHRPSKEIIQNDNVYIVISGSTDGSVAFWDLTDSVESFMKRVSVFNVEKFFDCQKRPRTGRGSQGGRRWRSLSNSLSKKRQDSLLVTSKAKDKTKNIVCATQGTSYIPSDSEDCKMVCSQSTHVPYSKLEIKTDNSSVEICEIQPLHLLQNTHQSGVNCLHVSEIKGGQNTDSCHVYSIISGGDDQALHHLIVELSSKSKCLNDGILTPDLVPKPEYGKGIDFQSQSKNCEIRFLNYEKLLSAHSSSVKGVWTDGSWVFSTGLDQRVRCWHLQRSKLIEHSHLIVSVPEPETLSARACGRNHYQICVAGRGMQIIDFSGS* 1384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0579 1383 ProSiteProfiles Trp-Asp (WD) repeats profile. 251 282 IPR001680 GO:0005515
Apr4g0579 1383 SUPERFAMILY WD40 repeat-like 1075 1342 IPR036322 GO:0005515
Apr4g0579 1383 SUPERFAMILY WD40 repeat-like 529 854 IPR036322 GO:0005515
Apr4g0579 1383 Gene3D - 521 861 IPR015943 GO:0005515
Apr4g0579 1383 Gene3D - 295 511 IPR015943 GO:0005515
Apr4g0579 1383 Gene3D - 1074 1374 IPR015943 GO:0005515
Apr4g0579 1383 Gene3D - 28 290 IPR015943 GO:0005515
Apr4g0579 1383 SUPERFAMILY WD40 repeat-like 29 217 IPR036322 GO:0005515
Apr4g0579 1383 PANTHER WD REPEAT PROTEIN 23 1382 - -
Apr4g0579 1383 MobiDBLite consensus disorder prediction 1119 1139 - -
Apr4g0579 1383 SUPERFAMILY WD40 repeat-like 144 546 IPR036322 GO:0005515
Apr4g0579 1383 SMART WD40_4 1054 1093 IPR001680 GO:0005515
Apr4g0579 1383 SMART WD40_4 244 283 IPR001680 GO:0005515
Apr4g0579 1383 SMART WD40_4 1297 1334 IPR001680 GO:0005515
Apr4g0579 1383 SMART WD40_4 770 823 IPR001680 GO:0005515
Apr4g0579 1383 SMART WD40_4 619 663 IPR001680 GO:0005515
Apr4g0579 1383 SMART WD40_4 333 373 IPR001680 GO:0005515
Apr4g0579 1383 SMART WD40_4 117 164 IPR001680 GO:0005515
Apr4g0579 1383 SMART WD40_4 504 546 IPR001680 GO:0005515
Apr4g0579 1383 SMART WD40_4 294 331 IPR001680 GO:0005515
Apr4g0579 1383 SMART WD40_4 563 603 IPR001680 GO:0005515
Apr4g0579 1383 Pfam WD domain, G-beta repeat 128 164 IPR001680 GO:0005515
Apr4g0579 1383 Pfam WD domain, G-beta repeat 249 282 IPR001680 GO:0005515
Apr4g0579 1383 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 251 282 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0579 K24737 - gmx:100780968 2280.75