Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0576 ATGTCGAAGCAAAGATTAGAGGGTAAGGTGGCTCTTATCACCGGGGCAGCTAGTGGGATTGGAGAAGAGACAGTGAGATTATTTGCTGAACATGGAGCACTTATTGTTGCAGCAGATGTTCAAGATGAACAAGGTCGCCAAGTTGCACTTTCAGTAGGCTCAGAAAGAGTGACATATCACCATTGTGATGTGAGAGATGAAAATCAAGTTGAAGAAACGGTGAAATACACTTTGGAAAAACATGGTCGCATAGATATCTTGTTCAGTAATGCTGGAATAATAGGGTCCTTATGTGGCATCCTTGAGCTTGATCTGAATGACTTTGACAGCACCATGGCTACAAATGTTCGTGGTGTAGCTGCCACAATTAAGCACACTGCACGTGCCATGGTTGCCAAAAGCATCCGTGGATCCATCATATGCACCACTAGTGTTGCTGCTTCCATTGGTGGAACGGGTCCTCATGGTTACACCACATCAAAACATGCTCTTTTGGGTCTTGTGAAATCAGCTTGTAGTGAGCTTGGAGCTTATGGAATAAGAGTTAATAGCATATCCCCTTTTGGGGTTGCCACACCTCTCACATGTGGAACATTCAATCTTGAACCTGATCAAGTTGAAGCTAATAGTTGCTCTCAGGCTAATCTTAAGGGTGTTGTGTTGAAGACTCGGCATATAGCAGAAGCAGCTTTGTTTCTTGCCTCTGATGAAGCTGTTTACGTTAGTGGCCACAACTTGGTGGTTGATGGTGGCTTCTCCGTGATTAAGCGTAGTTATTCTTCCACACTGTTTACATGA 798 0.4398 MSKQRLEGKVALITGAASGIGEETVRLFAEHGALIVAADVQDEQGRQVALSVGSERVTYHHCDVRDENQVEETVKYTLEKHGRIDILFSNAGIIGSLCGILELDLNDFDSTMATNVRGVAATIKHTARAMVAKSIRGSIICTTSVAASIGGTGPHGYTTSKHALLGLVKSACSELGAYGIRVNSISPFGVATPLTCGTFNLEPDQVEANSCSQANLKGVVLKTRHIAEAALFLASDEAVYVSGHNLVVDGGFSVIKRSYSSTLFT* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0576 265 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 3B 1 260 - -
Apr4g0576 265 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Apr4g0576 265 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Apr4g0576 265 PRINTS Glucose/ribitol dehydrogenase family signature 131 147 IPR002347 -
Apr4g0576 265 PRINTS Glucose/ribitol dehydrogenase family signature 157 176 IPR002347 -
Apr4g0576 265 PRINTS Glucose/ribitol dehydrogenase family signature 178 195 IPR002347 -
Apr4g0576 265 PRINTS Glucose/ribitol dehydrogenase family signature 216 236 IPR002347 -
Apr4g0576 265 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 1 260 - -
Apr4g0576 265 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Apr4g0576 265 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 IPR002347 -
Apr4g0576 265 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 IPR002347 -
Apr4g0576 265 Gene3D - 1 260 - -
Apr4g0576 265 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 254 IPR036291 -
Apr4g0576 265 Pfam Enoyl-(Acyl carrier protein) reductase 15 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0576 Apr-Chr4 4784249 4785237 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0576 2 254 Miscellaneous Gene Families AT2G29150 32.946 3.16e-24 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0576 - - gmx:100811279 469.544