Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0570 ATGGCTACGATCGCGAAAGCGCGCGTGTTTGGGGTAGTGAATTTTCAACTGAAAGAAACTGAGATGCCTTTTGCTTGTTCCAGCTTAATCCGCAAGCCTAGTGGAGTTTGTCCTCAGCGCAATGTGGCTCTAAGATGCAGAGGAAATGGCGCGATTATTCCCAAAATCAGATCCCAGAATCTTACTGAATCTGCTCCAGATTCCAAGTTTTACAAAGTGGAAGCGATTCTCAGGCCCTGGCGTGTCCCTCAGGCTTCTTCGGCTTTGCTGAAAATGGGAATTCGTGGTGTCACTGTATCTGATGTCAGGGGCTTTGGTGCTCAGGGTGGTTCAAAAGAAAGGCAGGGAGGCTCTGAGTTTTCTGAAGACAATTTTGTTGCCAAAGTTAAAATGGAAATAGTAGTGAGAGGGGACCAGGTTGAGGCAGTAGTAGACACAATTATTGAGGAGGCAAGAACTGGGGAGATTGGTGATGGAAAAATTTTCTTGATCCCCGTCTCAGATGTTATTAGAGTTCGCACAGGTGAACGTGGGGAACTGGCAGAGAGGATGACTGGGGGGCGAACTGACATATTATCTACTGTATGA 588 0.4694 MATIAKARVFGVVNFQLKETEMPFACSSLIRKPSGVCPQRNVALRCRGNGAIIPKIRSQNLTESAPDSKFYKVEAILRPWRVPQASSALLKMGIRGVTVSDVRGFGAQGGSKERQGGSEFSEDNFVAKVKMEIVVRGDQVEAVVDTIIEEARTGEIGDGKIFLIPVSDVIRVRTGERGELAERMTGGRTDILSTV* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0570 195 PANTHER NITROGEN REGULATORY PROTEIN P-II 35 191 IPR002187 GO:0006808|GO:0030234
Apr4g0570 195 ProSitePatterns P-II protein C-terminal region signature. 153 166 IPR017918 GO:0006808|GO:0030234
Apr4g0570 195 SMART P_II_3 73 175 IPR002187 GO:0006808|GO:0030234
Apr4g0570 195 ProSiteProfiles P-II protein family profile. 70 182 IPR002187 GO:0006808|GO:0030234
Apr4g0570 195 SUPERFAMILY GlnB-like 71 181 IPR011322 -
Apr4g0570 195 PRINTS P-II protein signature 71 86 IPR002187 GO:0006808|GO:0030234
Apr4g0570 195 PRINTS P-II protein signature 92 110 IPR002187 GO:0006808|GO:0030234
Apr4g0570 195 PRINTS P-II protein signature 122 145 IPR002187 GO:0006808|GO:0030234
Apr4g0570 195 PRINTS P-II protein signature 153 173 IPR002187 GO:0006808|GO:0030234
Apr4g0570 195 Pfam Nitrogen regulatory protein P-II 71 178 IPR002187 GO:0006808|GO:0030234
Apr4g0570 195 Gene3D - 59 191 IPR015867 -
Apr4g0570 195 PANTHER NITROGEN REGULATORY PROTEIN P-II HOMOLOG 35 191 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0570 - - gmx:100499915 311.227