Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0568 ATGGCCCCCGAACTCGTTCCTACCGCTGCGAAACCTGGTGCTGCGTTCACGAAGCCTGCCACTCTGGCGAGACGTGCCTACGTGACGTTTCTTGCTGGAAACGGTGACTACGTGAAAGGGGTAGTTGGACTCGCCAAAGGGTTGCGACGGGTGAAGACGGCGCACCCGTTGGTGGTGGCGGTGCTCCCCGATGTGCCGGAGGAGCACCGTAGGATGTTGGAGTCTCAGGGCTGCATTGTCCGTGAGATTGAACCCGTTTATCCACCCGAAAACCAGACCCAGTTTGCGATGGCTTATTACGTCATCAACTATTCCAAGCTCCGTATATGGGAGTTTGTGGAATACAGCAAGATGATCTACTTAGATGGAGACATTCAAGTGTTTGAAAACATAGACCACCTATTTGATTTGCCCGATGGTTACTTCTACGCTGTGATGGACTGCTTCTGCGAGAAGACGTGGAGTCACACCCCACAGTATAAAATCGGGTACTGCCAGCAATGTCCAAATAAGGCCCAGTGGCCCACCGAAATGGGCCCACCCCCTTCTCTTTACTTCAATGCTGGCATGTTCGTGTTCGAGCCCAACATCGCCACCTACCACGACCTATTGAAGACGTTGCAAGTTACTCCTCCTACTCCTTTTGCGGAACAAGACTTCCTGAACATGTACTTTAAGGACATTTACAAGCCAATCCCTTTGAACTACAACCTCGTACTTGCCATGTTGTGGCGTCACCCCGAGAATGTGAAGCTCGATGAAGTTAAGGTTGTTCACTATTGCGCCGCGGGGTCGAAGCCGTGGAGATATACGGGGAAGGAAGAGAATATGCAGAGGGAGGACATAAAGATGCTGGTGAAGAAATGGTGGGATATCTACGAGGATCCTTCGTTTGACTACAAGCCATTGAGTGGAACTGAAGGTGTCGCTGATGGTGTTGACATTGAGCCATTCGTCCAGGCTCTATCAGAGGTTGGTCAGGTTCAATATGTCACAGCACCCTCAGCAGCTTAG 1014 0.5118 MAPELVPTAAKPGAAFTKPATLARRAYVTFLAGNGDYVKGVVGLAKGLRRVKTAHPLVVAVLPDVPEEHRRMLESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPNKAQWPTEMGPPPSLYFNAGMFVFEPNIATYHDLLKTLQVTPPTPFAEQDFLNMYFKDIYKPIPLNYNLVLAMLWRHPENVKLDEVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVKKWWDIYEDPSFDYKPLSGTEGVADGVDIEPFVQALSEVGQVQYVTAPSAA* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0568 337 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Apr4g0568 337 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 337 - -
Apr4g0568 337 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 301 IPR029044 -
Apr4g0568 337 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 23 298 IPR029044 -
Apr4g0568 337 CDD GT8_Glycogenin 25 295 - -
Apr4g0568 337 PANTHER GALACTINOL SYNTHASE 1 1 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0568 Apr-Chr4 4720250 4722565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0568 1 337 Glycosyltransferase AT1G56600 73.373 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0568 K18819 - gmx:100809287 639.417