Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0562 ATGGACGCGAAGGATATATTGGGATTACCCAAAAACTCATTCCCACCCCTCGAGAAGAAGTCTCGACCTCCCAAAGAGTCTAAGAGAAAACCAGATGGCATTTCGCGCGAGGTTTATGCGCTTACTGGTGGCATGCCACCTCTTATGCCTGCTATTGAACCATCTCAATTGAAAAAAAAGCCTCCTTCTCTTGAAAAGATCACTTGGCAATGGCTTCCTTTCACCAGTTCTGCTCGTAAAGATAATCTTCAGCTTTACCATTGGGTTCGAGTTGTCAATGGTATTCCTCCTACGGGGAACTATTCTTTTGCCAAGTATAATAAGTCAGTTGACGTTATCAAGTACACAGACGAGGAGTATGACAAGTATTTGACTGATCCGATGTGGACCAAGGAGGAGACAAATCAACTATTTGACTTGTGTGAAAGATTTGATCTTCGATTGGTTATAATAGCTGATAGGTTCCCATCATCTCGAACTGTAGAGGAATTAAAGGATCGATATTATAGTGTATCCCGAGCGATATTAATTGTCAGGGCTCCATCTTCTGGGGATGTTGCAGCACATCCTCTTGTAAAGGAACCGTATAATGTTTCACAAGAAATGGAGCGAAAACGAGCACTATCCATGGTCCTCTCTCAAACAAGGCAACAAGAACGAAGAGATGAAGAGGTTCTTGTCGAAGCAAAAAGAATAGCTGAATCACGCATTCCTCCTAAGGTTGCTGAAGAGTCTCAGTTGGTTGCTTCTAATGCTGGTGCGGAAGTTACAAAGAGGACTGTCCCGGTTGAGACTGTATCTCCGTCCAATATGCAACTTCCATCAATGGTTGTGCCTTCTACATTATCAGATAACACATCTACTTTAGCTTCTCTTCGCATGCTTCATGTATATTTGAGAACATATGCTCTTGAGCAAATGGTACAAGCTGCAAACTCTTCTGCTGGACTTCGAACTATCAAGCGGGTTGAACAAACTTTGCAAGATCTTGGGGTCAATTTGAAACCAAGGGTTCCCACGAAAGCCGTTTGTGCAGAGCATCTTGAACTAAGAAAAGAAATACTAACTTGGCTGAATCTCCAGAAACAGGTGCAATATAAAGAAGCAGAAGGCTCATCTTTCCGTGATGGGTCATATGGTGAAACACCAGGCACGCCAAAGTGGGGATCAGGATCGGGCATTTATCTCCATATCATAATCTTGATGCAGCTGAGTCCTCCCCGTTCATTCATCTCCCTACACATATTTCTCCGTGACAATGAGGACGTTCCTAATCCTAGGCGGAGAAGATTTGCCGTATATCCTTCACGGCGTCGCCAAATTTTTCCTTGA 1332 0.4347 MDAKDILGLPKNSFPPLEKKSRPPKESKRKPDGISREVYALTGGMPPLMPAIEPSQLKKKPPSLEKITWQWLPFTSSARKDNLQLYHWVRVVNGIPPTGNYSFAKYNKSVDVIKYTDEEYDKYLTDPMWTKEETNQLFDLCERFDLRLVIIADRFPSSRTVEELKDRYYSVSRAILIVRAPSSGDVAAHPLVKEPYNVSQEMERKRALSMVLSQTRQQERRDEEVLVEAKRIAESRIPPKVAEESQLVASNAGAEVTKRTVPVETVSPSNMQLPSMVVPSTLSDNTSTLASLRMLHVYLRTYALEQMVQAANSSAGLRTIKRVEQTLQDLGVNLKPRVPTKAVCAEHLELRKEILTWLNLQKQVQYKEAEGSSFRDGSYGETPGTPKWGSGSGIYLHIIILMQLSPPRSFISLHIFLRDNEDVPNPRRRRFAVYPSRRRQIFP* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0562 443 SUPERFAMILY Homeodomain-like 128 171 IPR009057 -
Apr4g0562 443 MobiDBLite consensus disorder prediction 18 34 - -
Apr4g0562 443 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 2 387 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Apr4g0562 443 CDD SANT_DMAP1_like 129 171 - -
Apr4g0562 443 SMART sant 125 174 IPR001005 -
Apr4g0562 443 Pfam DNA methyltransferase 1-associated protein 1 (DMAP1) 313 375 IPR008468 GO:0005634|GO:0045892
Apr4g0562 443 Gene3D - 98 184 - -
Apr4g0562 443 MobiDBLite consensus disorder prediction 1 34 - -
Apr4g0562 443 Pfam SANT/Myb-like domain of DAMP1 101 175 IPR032563 -
Apr4g0562 443 PANTHER BNAA04G26950D PROTEIN 2 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0562 Apr-Chr4 4654359 4660295 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0562 K11324 - gmx:100818926 686.411