Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0557 ATGGCAAACAGACCGGATCCTGACATTGACGACGATTTTAATGAGCTCTATAAGGAGTACACTGGCCCCCCAGGATCTGCTACTACGAATACGCAAGAGAGGGCAAAACCAAATAAAAGGTCTAATGCAGGTTCTGACGAGGAGGAAGAAGCCCGGGACCCTAATGCTGTCCCAACTGATTTCACCAGCCGAGAAGCTAAGGTTTGGGAGGCTAAGTCGAAGGCTACTGAAAGGAACTGGAAGAAAAGGAAGGAGGAGGAAATGATATGCAAACTTTGTGGAGAATCAGGGCATTTCACTCAGGGTTGTCCATCTACACTTGGAGCAAATCGCAAGTCTCAAGATTTCTTTGAAAGGATACCTGCTAGAGACAAACAAGTACGGGCACTTTTCACGGAGAAAGTTATAAACAAGATTGAAAGGGATATTGGATGCAAAATTAAGATGGATGAGAAATTTATTATAGTCAGTGGTAAGGACAGGTTAATTTTGGCAAAAGGTGTTGATGCTGTGCACAAGATTCGAGAGGATGGTGATCAAAGGGGATCTTCTAGTTCTCAAATGACCCGTTCAAGATCACCTGAGAGGAGTCCGGTTAATTCTCGATTTCAAAGGTCTGAGCCTCAAAAGTCTCATTCTGGACCACGAAACACATCTCAGTTTCAACATAGGTTTGGTAGGCAAGAGAGGGCTGTTGAAGAGCGTGTCCGGGAGGACATTCAAAAGTTTGCAAGAGGTTCTCCACAAGCAAGAGCTTATGGAAATAGTGGAGCTAGAGGTCGTTCAAGCCAGTCAAGATCTCCAAGACAGGCCCCTTATACAGGGAACTCATATAATTCTTTTGATGGCCGTAATCAAAACATGGGTACTTATAGGAATGATGGGTGGGATTCTCATGGTAGAGAATCTGGTATCCAGCCTGGTCATCAGTTTGATTACAATGCCAGCCCTAAGACTTTAGAAGAATTAGAGTTGGAGCATAAGAACGAGGCAATGGAGCTAATGAAAATTCGTGACAGAGAAGAAGATGAAGAAAATTTCAAGCATCGTGAGACTATTAGAGATTTGAGGGAGAAGCACGTGAGCAGAGTTGCTTTGGTGAGGGCTGCACATGCAAAACAGTGGGAAGAATTTCTCCAGCTTGATGGGCAGAGGCGTCAACAGCAGGCAATCCAACAAATGTCATCTGGTTATCGAGGTTTTAAACAGCAGAGTTTTCCTGAATATGATGGGTCCAATGTTAATCCCCCATATGGTGGGACTAATTTACCCTTGGAATCGAGGAACAGGTTCTCAGACAACATGGAAACTTATCCTACTAGGCCTCATGATAATTTTGGTGAATTTCGCAGGCATGGAGATTTTGCAAAAGCTTACAACAGATATTAA 1389 0.437 MANRPDPDIDDDFNELYKEYTGPPGSATTNTQERAKPNKRSNAGSDEEEEARDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFERIPARDKQVRALFTEKVINKIERDIGCKIKMDEKFIIVSGKDRLILAKGVDAVHKIREDGDQRGSSSSQMTRSRSPERSPVNSRFQRSEPQKSHSGPRNTSQFQHRFGRQERAVEERVREDIQKFARGSPQARAYGNSGARGRSSQSRSPRQAPYTGNSYNSFDGRNQNMGTYRNDGWDSHGRESGIQPGHQFDYNASPKTLEELELEHKNEAMELMKIRDREEDEENFKHRETIRDLREKHVSRVALVRAAHAKQWEEFLQLDGQRRQQQAIQQMSSGYRGFKQQSFPEYDGSNVNPPYGGTNLPLESRNRFSDNMETYPTRPHDNFGEFRRHGDFAKAYNRY* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0557 462 MobiDBLite consensus disorder prediction 1 74 - -
Apr4g0557 462 MobiDBLite consensus disorder prediction 39 55 - -
Apr4g0557 462 MobiDBLite consensus disorder prediction 226 244 - -
Apr4g0557 462 MobiDBLite consensus disorder prediction 256 285 - -
Apr4g0557 462 MobiDBLite consensus disorder prediction 175 285 - -
Apr4g0557 462 MobiDBLite consensus disorder prediction 181 225 - -
Apr4g0557 462 ProSiteProfiles Zinc finger CCHC-type profile. 90 105 IPR001878 GO:0003676|GO:0008270
Apr4g0557 462 MobiDBLite consensus disorder prediction 23 38 - -
Apr4g0557 462 SUPERFAMILY Retrovirus zinc finger-like domains 77 109 IPR036875 GO:0003676|GO:0008270
Apr4g0557 462 PANTHER OS01G0252900 PROTEIN 1 462 - -
Apr4g0557 462 MobiDBLite consensus disorder prediction 1 17 - -
Apr4g0557 462 PANTHER OS01G0252900 PROTEIN 1 462 - -
Apr4g0557 462 Coils Coil 320 340 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0557 - - gmx:100806099 823.928