Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0552 ATGTCGATCAGAGATGCGTTTCTATGCTTCTTATTCATCGCAACTTATTCGATTTCAGCTGCTTCTGCGGATTCCATCTATGGCTGCGGTGGATTTGTCCAGGCGAGTTCTTCGTTGGTAAAGTCGAGGAAACAAACTGATTCCAAATTGGATTATTCAGCTGTCACGGTTGAGCTACAAACAGTGGATGGACTGGTAAAGGATAGAACACAATGTGCTCCAAATGGATACTATTTTATTCCAGTATATGACAAGGGTTCCTTTGTAATTAAAGTCAATGGTCCTGAAGGATGGACATGGGATCCAGAAAAGGTCTCAGTGGTGGTTGACAATCATGGTTGCAATGGCAATGAAGATATAAATTTTCGTTTCACAGGGTTCACTATATCTGGTAGAGTTGTGGGAGCTGTTGGGGGAGAAAGCTGCTCAGTTAAAAATGGAGGTCCTTCCAACGTTAAAGTTGAACTATTGTCCCTTTCTCAGGATCTTGTCTCTTCAGTCTTAACTTCATCAACAGGGAGTTACTTGTTTACAAATATAATTCCTGGAAAATATGAACTCCATGCTTCAAATCCTGATATGAAAGTTGAAGTTAAAGGTTCTACACAGTTGGAATTGGGCTTTGGAAATGGGGTAGTTGATGATGTTTTCTTTGTCCCAGGGTATAGTATTAGTGGATTTGTTGTTGCTCAGGGAAATCCAATATTAGGAGTCCATATTTTCTTATATTCGGATGATGTTTCTGAGGTAGAATGTTTGCAAGGTTCTGCTAGTGGTCCACGGCAAGGAGTAGCCCTCTGCCATGCTGTATCAGATGCGGACGGAAAGTTCACATTTAATTCAATACCTTGTGGAAGTTATGAACTTGTGCCCTACTATAAGGGTGAAAATACAGTATTTGATGTTTCCCCGCCCAGTGTCTCAGTTAATGTTAAGCATCAGCATGTAACTGTGCCGCAAAAATTTCAGGTAACTGGATTCTCTGTTGGAGGCCGTGTAGTTGATGGAAATGACATTGGAGTGGAGGGTGTCAAAATCATAGTTGATGGTCATCAAAGGTCTATTACTGACATTCAAGGATATTACAAGCTTGATCAGGTTACATCCAAGCATTATACCATAGAGGCACAAAAAGAGCATTACACATTCAAGAAATTGGAGAATTATATGGTATTGCCAAATATGGCTTCAATAGAAGATATTAATGCCATTTCATATGATCTTTGTGGTTTGGTTAGGATGGTTAGTGGTGGTCTGAAAGCAAAGGTGGCTTTGACTCATGGACCTGATAATGTGAAACCACAAAAGAAACAAACAGATGAAAATGGAAACTTCTGCTTCAAGGTTCTACCTGGTGAATATCGCCTGTCAGCTATTGCTCCTACTCCTGAGGATACTGCTGGACTCATGTTTTCTCCATCTTATATTGATGTTGTGGTCAAAAGCCCGTTGTTGAATATTGAATTTTCTCAAGCTCTGGTCAATATTCACGGTGCTGTGGCCTGCAAGGAGAAATGTGGTCCGTCTGTATCTGTTACCCTTATGAGACAGGTTGATAAACATAATGAAGAGAGAAAGACAATTAGCTTGACCCCCGAGAGTGATGAATTTCTGTTTTCAGATGTTATTCCTGGAAAATACAGACTTGAGGTCAAACATAGTTCACCTGAATCAGTGACCTTGGAAGATAATTGGTGCTGGGAGCAGAGCTTCATAGATGTAAATATTGGAGCTGAGGACTTAAAAGGAATCCTTTTTGCTCAAAAAGGCTATTGGGTGAATATTATCTCCACTCACAATGTTGATGGTTACATGACTCAACCAGATGGTTCAACTGTGAATTTGAAGATTTTGAAAGGTTCCCAGCGTATATGTGTGGAATATCCTGGCGTACATGAATTTGTTTTTGTTGACTCGTGTATTTTCTTTGGGAGTTCATCAGTGAAAATTGATACACATAATCAATTGCCTATCCATCTAAAAGGAGAAAAGTATCTTCTCAAAGGACAGATAAATGTGCTGTCTGGTTCACTTGATGCATTGCCTGAGAATATAGTTGTTGATATTCATCATGATGGAGCTGGTGATATTGATCATGCTACAGCTACATTAAAGTCCCATGAGAAGGATCAAACAGCTATATTTGAGTATTCTTTTTGGGCCAATCTCGGAGAAAAGCTTACCTTTGTTCCATGGGACTCAAGGAACGATGGGCAGAAAAAACTTCTATTTTATCCTAGGGAGCATCATGTATCAGTGACAGATGATAATTGTCAAGCTCATATTCCAACATTTTCTTGTCAACTGGGTGTATATTTTGAAGGGTCAGTTTCACCTCCTCTTTCTGGCGTTCATATCAGGGTTTTTGCTGCTGGAGACAGTAGCATTACTGCACTTAAAAGTGGTGAATTAGTACTTGAAACAAGCACTGGGACCGATGGTTCTTTTGTGGCAGGTCCTCTGTATGATGATGTTGGTTACAATGTTGAAGCTTCAAAGCCTGGATATCATTTAAAACAAGTTGGGCCTTATTCCTTTACTTGTCAGAAGCTTAGTCAAATTTCAGTACGTATACATCACAAAGATGATGCCACAGACCCTATTGCTTCTGTTCTCTTATCTCTGAGTGGTGACAATGGTTATAGAAACAACTCAGTATCTGGGACTGGAGGGACATTCCTGTTTGATAATTTGTTTCCTGGAATGTTCTATTTACGTCCTGTTTTAAAGGAGTATGCTTTCTCACCTACAGCACAGGCAATAGAGCTTGGAGCAGGGGAGTTTAGAGAAGTTATTTTTCAGGCCACGCGTGTAGCTTACAGTGCTACAGGCAAAGTCACCTTGTTGTCTGGCCAACCCAAAGGAGAAGTTTCAATTGAAGCCCGGTCAGAGTCAAAAGGCTATTTTGAGGAAACTCTGACAGATTCTTCTGGAAATTATCGTCTGAGAGGATTACTGCCTGATACTGTCTATGTTGTTAAAGTAGCTAAAAGGGATGTTGTGGGCAGTTCTAATATAGAGCGTGCATCTCCAGATTCTATTGGTGTCAAGGTTGGAAAAGAGGATATCAAGGGTTTGGATTTTATAGTTTTTGAGGAACCGGAAATGACAATTATAAGTTGCCATGTCGAAGGAAATGGTACAGATGAACTGCGTAAACACCTGATGGTTGAAATCAGGCCAGCTAGTGACACAACCAGGGTAGAGTCAGTCTTCCCCCTGCCAATTTCTAACTTCTTTCAAGTCAAGGGCTTATCAAAGGGCAGACACCTTCTACAGCTTCGATCTGGTCTCCCATCAAGCTCGCTCAAATTTGAATCTGATATTGTTGAGGTCGACTTGGAGAAAAATATTCAAATCCATGTGGGCCCACTGCGATACAGGATTGAAGATCAGCTGAAGCAGGAGTTGACTCCAGCACCAGTATTCCCTCTTATAGTTGGATTTGTAGTTGTTGCACTATTTCTTAGCATGCCAAGATTGAAGGATTTGTATCAAGCCACAGTAGACATACCCACGCCAGGACTCAGTGCGACTTCAAGAAAAGACGTGAGAAAGCCAACGTTGCGAAAGAAGACATATTAA 3585 0.407 MSIRDAFLCFLFIATYSISAASADSIYGCGGFVQASSSLVKSRKQTDSKLDYSAVTVELQTVDGLVKDRTQCAPNGYYFIPVYDKGSFVIKVNGPEGWTWDPEKVSVVVDNHGCNGNEDINFRFTGFTISGRVVGAVGGESCSVKNGGPSNVKVELLSLSQDLVSSVLTSSTGSYLFTNIIPGKYELHASNPDMKVEVKGSTQLELGFGNGVVDDVFFVPGYSISGFVVAQGNPILGVHIFLYSDDVSEVECLQGSASGPRQGVALCHAVSDADGKFTFNSIPCGSYELVPYYKGENTVFDVSPPSVSVNVKHQHVTVPQKFQVTGFSVGGRVVDGNDIGVEGVKIIVDGHQRSITDIQGYYKLDQVTSKHYTIEAQKEHYTFKKLENYMVLPNMASIEDINAISYDLCGLVRMVSGGLKAKVALTHGPDNVKPQKKQTDENGNFCFKVLPGEYRLSAIAPTPEDTAGLMFSPSYIDVVVKSPLLNIEFSQALVNIHGAVACKEKCGPSVSVTLMRQVDKHNEERKTISLTPESDEFLFSDVIPGKYRLEVKHSSPESVTLEDNWCWEQSFIDVNIGAEDLKGILFAQKGYWVNIISTHNVDGYMTQPDGSTVNLKILKGSQRICVEYPGVHEFVFVDSCIFFGSSSVKIDTHNQLPIHLKGEKYLLKGQINVLSGSLDALPENIVVDIHHDGAGDIDHATATLKSHEKDQTAIFEYSFWANLGEKLTFVPWDSRNDGQKKLLFYPREHHVSVTDDNCQAHIPTFSCQLGVYFEGSVSPPLSGVHIRVFAAGDSSITALKSGELVLETSTGTDGSFVAGPLYDDVGYNVEASKPGYHLKQVGPYSFTCQKLSQISVRIHHKDDATDPIASVLLSLSGDNGYRNNSVSGTGGTFLFDNLFPGMFYLRPVLKEYAFSPTAQAIELGAGEFREVIFQATRVAYSATGKVTLLSGQPKGEVSIEARSESKGYFEETLTDSSGNYRLRGLLPDTVYVVKVAKRDVVGSSNIERASPDSIGVKVGKEDIKGLDFIVFEEPEMTIISCHVEGNGTDELRKHLMVEIRPASDTTRVESVFPLPISNFFQVKGLSKGRHLLQLRSGLPSSSLKFESDIVEVDLEKNIQIHVGPLRYRIEDQLKQELTPAPVFPLIVGFVVVALFLSMPRLKDLYQATVDIPTPGLSATSRKDVRKPTLRKKTY* 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0552 1194 PANTHER NODAL MODULATOR 1-RELATED 7 1179 - -
Apr4g0552 1194 Gene3D - 331 405 - -
Apr4g0552 1194 SUPERFAMILY Carboxypeptidase regulatory domain-like 327 394 IPR008969 -
Apr4g0552 1194 SUPERFAMILY Starch-binding domain-like 218 297 IPR013784 GO:0030246
Apr4g0552 1194 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 7 1179 - -
Apr4g0552 1194 SUPERFAMILY Cna protein B-type domain 146 196 - -
Apr4g0552 1194 Gene3D Immunoglobulins 143 216 IPR013783 -
Apr4g0552 1194 SUPERFAMILY Cna protein B-type domain 862 921 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0552 - - ccaj:109814730 2125.13