Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0550 ATGGCTATCGATAAAAGCCTTTTCGTCTTTGTGTCTCTATCTTCTCTCCTCTTATCCATCCATGCCATGCCTTCACCTCATAATGTGCCCTATGTATCTCCATTAACTAACCTAAACAATGACATAGACTCTATCTTGAAGGAAGCAATCAAAGTTGGCGAACACATATTCAAGCCCGAGCCTGAGGTATTAGAATTTTGTAGAGGCACAGAGAACCCAACCTTTTGTGCAGAAACCATTGCCCCATATTTCCAAAGTTCTTTTGACCCCCTTAAGGCACTCGAGATTGAAATGAAGGCCACCTTAAACCAAAGCTTGAAGGTTTCTCGTATCATTGCCAAATCAATCAGCAGCCCCACCACCAATAAAAGGGCACTTAAAGCACTTTACTTATGCAAGTCACAATACAACACCATTTTGTATACCATCAAAGAAGCCATAGACTTGTTAAACCAACAAAACGTGGTCGATGCTTATTACAAGTTTAACTTAGTGTTGTCCAAAAGCTTAGCTTGTGAGTATGCTTTTCTGGAATCTCCTGGAGTTGACATTCCCTTCGCTGATGACTCTTTTGCTGTGTCTCAGCATGGTTTCAAAATTCTCGTTCCTAACACAAGGGTGTTTTTGAATTTCGTATTGGTGGATTTTGATACACAAATGCTGCACGACTTCTGTATAGTTCAAAGGTTGTAG 693 0.4055 MAIDKSLFVFVSLSSLLLSIHAMPSPHNVPYVSPLTNLNNDIDSILKEAIKVGEHIFKPEPEVLEFCRGTENPTFCAETIAPYFQSSFDPLKALEIEMKATLNQSLKVSRIIAKSISSPTTNKRALKALYLCKSQYNTILYTIKEAIDLLNQQNVVDAYYKFNLVLSKSLACEYAFLESPGVDIPFADDSFAVSQHGFKILVPNTRVFLNFVLVDFDTQMLHDFCIVQRL* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0550 230 Pfam Plant invertase/pectin methylesterase inhibitor 65 195 IPR006501 GO:0004857
Apr4g0550 230 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 64 194 IPR035513 -
Apr4g0550 230 TIGRFAM PME_inhib: pectinesterase inhibitor domain 62 210 IPR006501 GO:0004857
Apr4g0550 230 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 4 195 - -
Apr4g0550 230 SMART PMEI_2 58 208 IPR006501 GO:0004857
Apr4g0550 230 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 203 IPR035513 -
Apr4g0550 230 PANTHER PECTINESTERASE 4 195 - -
Apr4g0550 230 CDD PMEI-like_2 60 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0550 Apr-Chr4 4554395 4557937 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0550 - K24774 aprc:113861030 447.203