Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0549 ATGGAAGATTTAGGCGGTAGTCGATTTGATGGCCTCAGCAATGCTGTGAGAAGGAAGAGGAGTCAAACTTCGCGCAGGCCTCGACCTGATTCACAGCCTGTTTCTGAAGGTCAGGAGCTGTCTCCCATGTCATCCACACCGCCTTCAGAGGATGCCGGCAAGGCCTCCAGTGATGAGAACGCTGGTTTTGATACTAATTCCAAGAGAAAGGAATTCAATCTTAACCATTGCGTCTCGCAGACCTCGTCTGGTACTGGCGTTGATGATGATAAATTCCATAAAAAGAGTAAAAAGGATGGAGGGTTCCATGCGTTTTATAATAATGAGCCTGGACGAAGTGGTTTACATAATAAACGCTGTAGTGAAGGCGTTCTTGCCCCGGCAAATTGGAAAGGTTCTAGCAAAGTGAAGGATAACTTCGATTCAGAGTCAAGAAATCCAGACTTATATGCCGGAAGGAATCCCGAGAGTCTGAGTTTGGGGCAGTTTGGTGGTTCTTCTCAGGATGGATCAGGGAGTGAGAACAGGGTTAAGAAGGTTAAACTCAAGGTTGGCGGTGTTACACGTACTATTCAAGCCAACTCAGCATCCAATGGTGCTTCAGGAAGTGGGTCAACTGCAAAGAGCTCTCGTTCATCAGATGCCTCCAGACCACGCCAAAAGCACCAGGGTGTTCCATGGAAGGATTTCTCGAGGGGTGGTTTTGGTCTAGGGAAGGAGGAATCTCTGATGGGGAAGATATCTGGAAAGAATGCATCTAGTAAGCTGGGAGACAAGTCTGAACCAGTTCGTAAGAGCAAGCGAGTGCCGAAGAGACGTGTACTTGATGGAGAATTTGGTGATGAAGATGACGAGGATGATGAGATTCGATACTTGGAAAAGCTGAAAACATCAAAAGTTTCTGCAGTCTATAGAGATGAAGAGGAAGTAGGCAAAAAGCACCGAAAACTCTCTAGTGTCTCTAATATGGAAAATGCTACCTTGTCAAGGTCAGGTAAAGATGGTAAGAAAAGGTCTAGATCTGATAGAATGTATGAGGACACAGATTATGAGGGTGAAGAGGAGTCAGGGTCTGATGGTGAGCTTGAGGATAAGAAAAAGAAAAAACAGAGGAAGGAATCTGTTGATGTATTGATGGACAGCAAGAGGGAAATGACTCTTACAACACGTCAACGGGCCCTTCAATCAAGCAAAGATGCCTCTGCGTCTGGCACTAGTTTAATTGAGTTTCCCAACGGATTACCACCAGCCCCGCCTAGAAAGCAAAAGGAGAAGCTTACGGAAGTAGAGCAACAATTGAAGAAAGCTGAGGCTGCCCAGAGGCGGAGAATGCAAGTTGAGAAGGCTGCCAGGGAATCTGAGGCTGAAGCTATCAGAAAAATACTTGGTCAAGACTCCAGTAGGAAGAAGCGAGAAGAGAAAATGAAGAAGCGCCAGGAAGAGCTGGCACAGGAAAAGGCAGCAAATGCACGAATGCTTGCATCAAATACCATCAGATACGTGATGGGTCCGACTGGGACAATTGTGACTTTTCCTGAGGAAATGGGTCTCCCTTGCGTATTCAACTCCAAACCTGTCAGTTATCCTCCACCTCGCGAGAAGTGTGCCGGTCCATCTTGCGTGAACCCTTACAAGTATCGGGATTCTAAATCAAAGCTTCCTCTTTGTAGTCTCCAATGCTACAAGGCCGTCCAGGAGAAGATGGCGGCTGAAACTACCTGTTGA 1725 0.4661 MEDLGGSRFDGLSNAVRRKRSQTSRRPRPDSQPVSEGQELSPMSSTPPSEDAGKASSDENAGFDTNSKRKEFNLNHCVSQTSSGTGVDDDKFHKKSKKDGGFHAFYNNEPGRSGLHNKRCSEGVLAPANWKGSSKVKDNFDSESRNPDLYAGRNPESLSLGQFGGSSQDGSGSENRVKKVKLKVGGVTRTIQANSASNGASGSGSTAKSSRSSDASRPRQKHQGVPWKDFSRGGFGLGKEESLMGKISGKNASSKLGDKSEPVRKSKRVPKRRVLDGEFGDEDDEDDEIRYLEKLKTSKVSAVYRDEEEVGKKHRKLSSVSNMENATLSRSGKDGKKRSRSDRMYEDTDYEGEEESGSDGELEDKKKKKQRKESVDVLMDSKREMTLTTRQRALQSSKDASASGTSLIEFPNGLPPAPPRKQKEKLTEVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKKREEKMKKRQEELAQEKAANARMLASNTIRYVMGPTGTIVTFPEEMGLPCVFNSKPVSYPPPREKCAGPSCVNPYKYRDSKSKLPLCSLQCYKAVQEKMAAETTC* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0549 574 SMART PAPA_1_2 430 515 IPR006880 GO:0031011
Apr4g0549 574 MobiDBLite consensus disorder prediction 257 278 - -
Apr4g0549 574 MobiDBLite consensus disorder prediction 188 213 - -
Apr4g0549 574 MobiDBLite consensus disorder prediction 27 53 - -
Apr4g0549 574 PANTHER INO80 COMPLEX SUBUNIT B 1 574 IPR029523 GO:0006338|GO:0031011
Apr4g0549 574 MobiDBLite consensus disorder prediction 300 423 - -
Apr4g0549 574 Coils Coil 429 456 - -
Apr4g0549 574 MobiDBLite consensus disorder prediction 72 86 - -
Apr4g0549 574 MobiDBLite consensus disorder prediction 388 408 - -
Apr4g0549 574 MobiDBLite consensus disorder prediction 359 387 - -
Apr4g0549 574 MobiDBLite consensus disorder prediction 439 479 - -
Apr4g0549 574 Pfam HIT zinc finger 531 562 IPR007529 -
Apr4g0549 574 MobiDBLite consensus disorder prediction 300 319 - -
Apr4g0549 574 MobiDBLite consensus disorder prediction 159 173 - -
Apr4g0549 574 PANTHER HIT ZINC FINGER AND PAPA-1-LIKE DOMAIN-CONTAINING PROTEIN 1 574 - -
Apr4g0549 574 MobiDBLite consensus disorder prediction 1 287 - -
Apr4g0549 574 MobiDBLite consensus disorder prediction 330 347 - -
Apr4g0549 574 Pfam PAPA-1-like conserved region 430 515 IPR006880 GO:0031011
Apr4g0549 574 Coils Coil 468 489 - -
Apr4g0549 574 MobiDBLite consensus disorder prediction 87 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0549 Apr-Chr4 4550642 4554913 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0549 - - gmx:100814323 868.611