Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0540 ATGGCAACGATGGCTGGTGTGAGCGTTTCAAGCCCCAAGGTCTTCTTCAAGGCATCGGGCTCACTGCAGAATGCCCAGCCCATCAAGTTTTCACTTCCACCAAGCCCAGGCGGGCCCGCAATTATTATTAGATCGGGTCGGATGGTAACGATCCGACCCGTTCGGGCTGTGCCGGAGAGTATATCGGAGAAGGTTGAAGAGAGCATAAAGAACGCGCAAGAAGCTTGCGCTGGAGACCCTACTAGCGGCGAGTGCGTGGCGGCGTGGGACGAGGTCGAGGAGCTGAGCGCAGCGGCCAGCCATGCTAGGGACAAGCAAAAGGAAAAGGATTCCGACCCGCTTGAGAATTACTGCAAGGATAACCCCGAAACTATTGAGTGCAAAACTTTCGACGACTGA 399 0.5539 MATMAGVSVSSPKVFFKASGSLQNAQPIKFSLPPSPGGPAIIIRSGRMVTIRPVRAVPESISEKVEESIKNAQEACAGDPTSGECVAAWDEVEELSAAASHARDKQKEKDSDPLENYCKDNPETIECKTFDD* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0540 132 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 1 132 IPR039314 -
Apr4g0540 132 MobiDBLite consensus disorder prediction 97 122 - -
Apr4g0540 132 PANTHER CALVIN CYCLE PROTEIN CP12-1 1 132 - -
Apr4g0540 132 SMART CP12_2 61 132 IPR003823 -
Apr4g0540 132 Pfam CP12 domain 61 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0540 Apr-Chr4 4493711 4494459 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0540 - - gmx:100812168 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0540 4 4493711 4494459 Apr8g0071 8 597809 598451 PCT