LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr4g0517	ATGGGTTTCCAAAATGGCAGTGAACGCCTCAGAACAATTTGGACACCTGAGATGGATCGGTATTTCATTGATCTTATGTTAGAGCAGGTTGGCCAAGGTAGTAAATTTGATGATCATTTGTTTAGCAAACGAGCTTGGAAGCAAATGTCCTCAATGTTCAATGCCAAGTTCAATTTTCAGTTTGAAAAAGATGTTCTCAAGAATCGCCACAAAACGTTAAGGAATTTGTACAGGGGAGTTAAAAATCTTCTTGCCAAACCGGGGTTTAGCTGGGATAAAAAGCGAAATATGGTCATTGCTGATAATCATGTTTGGGATGAATATCTCAAGCAGGTAGATGCGAGTGTACGATCATGCAGAGTGAAAAGCATTCCCTATTTTAAAGATTTGTGTGCAATTTATGGACATGCAACGATGGCAGGAAAAAGTGATAATGCACAAGAAGGGTCACCTAATTCAGGTGAAAATGGACCAATCATATCCTGCCTATCTAAGGATGTTGGTGAGGATGCTGATGAGGTTCTGCATGATGGAAAGGTTGATGAAGACTGTGGAATCTCTACCATGGAGAATGCAACCGATGATTGTGAGCAGAGGGCATCGAAGGAAACATCAACCTCTTTTTGTACCCGCACTCGGACATATTGGCAGCCACCGATGGATCGTTACTTCATTAACTTAATGCTTGCTCATGTGCACAAAGGGAATCAATCTGATGGTGTCTTCAGCAAACAAGCATGGATAGAGATGATTTCATCATTCAATGAAAAATTTGGTTTTGACTATAGTTTGGAGATTCTTAAAAATAGATACAAAACCATGAGAAGGCAATACAATTTAATTAAAAATCTTCTTCAGTTGGATGGGTTTGCCTGGGATGAAACACGCCTGATGGTTACTGCAGATGATTGTGTCTGGCAAGATTATATTAAGGTTCATACTGATGCACGACAATATATGACCCGACCTTTGCCATATTATAAAGATTTGTGTGTCATATGTGATCCAAATTTTGATGAAAAAGAATCTTCTCTGCCTAAAGATAAGCATCAAAATGTAGTTGATTTTAAGACTGGGAGTCCTTGGACATCCAAAACTGGTCAATCTCCAATTACACCCAATTCCAATGAAGACCATTTTAATGGTGTTGAGGAATTAGCTCATATAGGTCAGAAACAAAAGCGTCAATTAGAAAAGTGTTCTGATTCTACCAGTCCTAAGAAATCAAGGAATGATGAACAAGGCATGGCTGTTGCTCTCCATGAGATGGCAGCTGTGGTTTCAACTCTGTCTACGAAAAAGAATGATGATAATTCAATATCAATAGAGAATGTCATAGAAGCAGTACAAGCATTGCCTGATATGGATGAAGATCTGGTTTTGGATGCTTGCGATTTCCTGGAGGATGAAAGGAAGGCCAAAACATTTCTTGCATTGGATGTCAAGTTAAGAAAGAAATGGTTGATTAGGAAACTTCGCACACAGGTGTAG	1491	0.391	MGFQNGSERLRTIWTPEMDRYFIDLMLEQVGQGSKFDDHLFSKRAWKQMSSMFNAKFNFQFEKDVLKNRHKTLRNLYRGVKNLLAKPGFSWDKKRNMVIADNHVWDEYLKQVDASVRSCRVKSIPYFKDLCAIYGHATMAGKSDNAQEGSPNSGENGPIISCLSKDVGEDADEVLHDGKVDEDCGISTMENATDDCEQRASKETSTSFCTRTRTYWQPPMDRYFINLMLAHVHKGNQSDGVFSKQAWIEMISSFNEKFGFDYSLEILKNRYKTMRRQYNLIKNLLQLDGFAWDETRLMVTADDCVWQDYIKVHTDARQYMTRPLPYYKDLCVICDPNFDEKESSLPKDKHQNVVDFKTGSPWTSKTGQSPITPNSNEDHFNGVEELAHIGQKQKRQLEKCSDSTSPKKSRNDEQGMAVALHEMAAVVSTLSTKKNDDNSISIENVIEAVQALPDMDEDLVLDACDFLEDERKAKTFLALDVKLRKKWLIRKLRTQV*	497

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr4g0517	496	Coils	Coil	264	284	-	-
	Apr4g0517	496	MobiDBLite	consensus disorder prediction	394	409	-	-
	Apr4g0517	496	MobiDBLite	consensus disorder prediction	357	379	-	-
	Apr4g0517	496	PANTHER	EXPRESSED PROTEIN	198	350	-	-
	Apr4g0517	496	PANTHER	EXPRESSED PROTEIN	4	160	-	-
	Apr4g0517	496	PANTHER	EXPRESSED PROTEIN	380	494	-	-
	Apr4g0517	496	MobiDBLite	consensus disorder prediction	394	413	-	-
	Apr4g0517	496	Pfam	Myb/SANT-like DNA-binding domain	215	309	IPR024752	-
	Apr4g0517	496	Pfam	Myb/SANT-like DNA-binding domain	14	108	IPR024752	-
	Apr4g0517	496	PANTHER	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	198	350	-	-
	Apr4g0517	496	PANTHER	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	4	160	-	-
	Apr4g0517	496	PANTHER	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	380	494	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr4g0517	Apr-Chr4	4302731	4306070	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr4g0517	-		-	gmx:100787716	785.408