Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr4g0514 | ATGGCTCTGAAGTGGCATCCTGATAGGTGGATCAAGGAACCGAAGCTTGCATTAGAAGCTAAAAAGCGGTTTCAACGCGTTCAAGAGGCTTATTCAGTTTTGTCCAATAAAGGGAAGAGAAGGATATACGACGCTGGCTTCTTTGGTCTCATTGGAGAGGACGACGATGGGGAATTTGTTGATTTTATGCAAGAAATGATTTTAATGATGCAGAAAGTGAGACCCAAGGATGAGAAAGGCATGATGGAGGATCTTCAGGGATTGCTAATTGATATGATGATGGCAGATAATGAAGGGATGAATAACGAGTCTGGGTTAAGCTGGGGTTCTTCTCAATGTTCTCGGAAAAAGACACGAATCTTATGA | 366 | 0.4235 | MALKWHPDRWIKEPKLALEAKKRFQRVQEAYSVLSNKGKRRIYDAGFFGLIGEDDDGEFVDFMQEMILMMQKVRPKDEKGMMEDLQGLLIDMMMADNEGMNNESGLSWGSSQCSRKKTRIL* | 122 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr4g0514 | 121 | PANTHER | DNAJ HOMOLOG SUBFAMILY B MEMBER 6-LIKE | 1 | 120 | - | - | |
| Apr4g0514 | 121 | ProSitePatterns | Nt-dnaJ domain signature. | 24 | 43 | IPR018253 | - | |
| Apr4g0514 | 121 | SUPERFAMILY | Chaperone J-domain | 1 | 66 | IPR036869 | - | |
| Apr4g0514 | 121 | CDD | DnaJ | 1 | 36 | IPR001623 | - | |
| Apr4g0514 | 121 | MobiDBLite | consensus disorder prediction | 101 | 121 | - | - | |
| Apr4g0514 | 121 | Pfam | DnaJ domain | 1 | 44 | IPR001623 | - | |
| Apr4g0514 | 121 | PANTHER | PUTATIVE, EXPRESSED-RELATED | 1 | 120 | - | - | |
| Apr4g0514 | 121 | Gene3D | DnaJ domain | 1 | 46 | IPR036869 | - | |
| Apr4g0514 | 121 | ProSiteProfiles | dnaJ domain profile. | 1 | 47 | IPR001623 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Apr4g0514 | Apr-Chr4 | 4280312 | 4281253 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Apr4g0514 | - | - | gmx:100794942 | 199.519 |