Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0507 ATGTCGAATTTTATCGATAAATCCATTTTAAGCGTAAATAACATTTTGGTGTCAAACATATTATATTCTCATTCAACGACAATACGGAGTAAAATACAGAAGGATCGCCACTTCCGAAGCTGGGAAGAACATAACAGACATATATACAAAGTGATCGTCATGTCTACGCAACCAAAACTTGGTCGGGTTCCCAGTATCAGAGACCGAGTTGAAGATACTCTCTCTGCTCATCGCAACGAACTCATTTCTCTCCTCTCCAGGTATGTGGCACAGGGAAAAGGGATTTTGCAGCCTCATAATTTGATTGATGAGCTTGACAACATCCCTGGGGAGGATCAAGCAACAGTTGATCTTAAAAATGGCCCTTTCGGTGAAATTATCAAGTCTGCACAGGAAGCCATAGTTTTGCCTCCTTTTGTGGCAATAGCAGTTCGCCCGAGACCTGGTGTTTGGGAATATGTCCGTGTTAATGTCTTTGAACTCAGTGTGGAGCAATTAGGCGTTTCTGAATATCTCAACTTCAAAGAAGAACTTGTAGATGGAAAGATTAATGACAATCTTGTATTGGAGCTTGATTTTGAGCCATTTAATGCCTCGTTTCCTCGGCCGAGCCGCTCATCGTCCATTGGCAATGGTGTCCAATTTCTTAACCGCCACCTTTCTTCAATTATGTTTCGCAATAAAGATTCCTTGGAACCTTTGCTTGATTTCCTTCGAGTTCACAAATACAAAGGCCATGCACTGATGTTAAATGATCGAATACAATCCATCTCCAAACTTCAGTCTGCTTTGGTCAAGGCTGAGGATTATCTTTCTAAGCAAGCACGTGATACACCCTATTCTGAGTTTGAATATGTATTGCAAGGAATGGGTTTTGAGAGAGGTTGGGGTGATACTGCTCAGCGGGTATTGGAGATGATGCACCTGTTGTTGGATATTCTTCAGGCTCCTGATCCTTCTACATTAGAGACTTTTCTTGGGAGAGTGCCTATGGTGTTCAATGTTGTTATATTATCTCCTCATGGCTACTTTGGGCAAGCCAATGTCTTGGGTTTGCCTGACACTGGTGGGCAGGTTGTTTATATATTAGATCAAGTGCGTGCCCTTGAAAATGAGATGCTCCTTCGGATCCAGAAACAAGGACTTGATTTCACTCCTAGAATTTTAATTGTCACAAGGTTAATACCTGATGCAAAGGGGACAACATGCAATCAGCGACTAGAAAGAGTCAGTGGTACTGACTACACTCATATTTTGCGAGTTCCATTCAGATCAGATAGCGGAACTCTCCGCAAATGGATCTCAAGGTTTGACGTGTGGCCTTATCTAGAGACTTATGCTGAGGATGTTGCCAGTGAAATTGCTGCTGAGTTGCAGGGTTATCCTGATTTCATCATTGGAAACTACAGTGATGGGAATCTTGTTGCATCTTTATTGGCTTATAAAATGGGAGTTACACAGTGCACAATCGCGCATGCACTTGAGAAGACAAAATATCCAGATTCAGATATCTATTGGAAGAAATTTGAGGATAAATACCATTTTTCATGCCAGTTCACTGCTGACCTAATAGCCATGAACAATGCTGATTTTATCATCACCAGTACATACCAAGAGATTGCAGGAACGAAGAATACTGTTGGCCAGTATGAGAGCCACACTGCTTTTACTCTTCCTGGACTCTATAGGGTTGTACATGGCATTGATGTTTTTGATCCCAAGTTCAATATTGTCTCTCCTGGAGCAGATATGTCAATATATTTCCCCTACTCCGAAAAGCAGAAAAGGCTTACGGCCCTGCATGGTTCGATTGAAAAGCTATTATATGATACTGAGCAGACTGATGAATACATTGGCTCGCTAAAGGACCGGTCAAAGCCCATAATTTTCTCTATGGCAAGGCTCGACAGAGTGAAAAACATAACCGGTTTGGTAGAAAGCTATGGTAAGAACAGCAAATTGAGGGAACTGGTCAACCTTGTCGTTGTAGCTGGTTACATTGATGTCAGTCAGTCCAGGGACAGAGAAGAAATTGCAGAAATAGAGAAGATGCATGATCTCATGAAAACATATAATTTGAATGGTGATTTTCGGTGGATCGCTGCCCAAACAAACCGAGCACGTAACGGGGAGCTGTATCGCTACATAGCAGACACAAAAGGTGCTTTCATTCAGCCTGCTTTCTATGAAGCTTTTGGACTTACAGTTGTGGAGGCCATGACTTGTGGACTCCCCACATTTGCTACTTGCCATGGTGGTCCTGCTGAGATCATTGAGCATGGTATATCAGGATTCCATATTGATCCTTATCACCCTGATCAAGCTTCAGAGCGGTTGGTTGAATTCTTCCAGAAATGCAAGGAGGAGCCAAGCCATTGGAATAAGGTATCTGATGGAGGGCTTCAAAGAATTTACGAAAGGTACACATGGAAGATTTATTCTGAAAGGCTTATGACCTTGGCGGGAGTTTATAGTTTCTGGAAATACGTTTCCAAATTGGAGAGGCGTGAAACTCGACGATATCTTGAGATGTTCTACATCCTTAAGTTTCGTGATTTGGCAAAGTCTGTTCCACTAGCAAAGGACGACGCAAGTTAA 2598 0.4226 MSNFIDKSILSVNNILVSNILYSHSTTIRSKIQKDRHFRSWEEHNRHIYKVIVMSTQPKLGRVPSIRDRVEDTLSAHRNELISLLSRYVAQGKGILQPHNLIDELDNIPGEDQATVDLKNGPFGEIIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVFELSVEQLGVSEYLNFKEELVDGKINDNLVLELDFEPFNASFPRPSRSSSIGNGVQFLNRHLSSIMFRNKDSLEPLLDFLRVHKYKGHALMLNDRIQSISKLQSALVKAEDYLSKQARDTPYSEFEYVLQGMGFERGWGDTAQRVLEMMHLLLDILQAPDPSTLETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTDYTHILRVPFRSDSGTLRKWISRFDVWPYLETYAEDVASEIAAELQGYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFEDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSEKQKRLTALHGSIEKLLYDTEQTDEYIGSLKDRSKPIIFSMARLDRVKNITGLVESYGKNSKLRELVNLVVVAGYIDVSQSRDREEIAEIEKMHDLMKTYNLNGDFRWIAAQTNRARNGELYRYIADTKGAFIQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGISGFHIDPYHPDQASERLVEFFQKCKEEPSHWNKVSDGGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLAKSVPLAKDDAS* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0507 865 Gene3D - 65 201 - -
Apr4g0507 865 PANTHER SUCROSE SYNTHASE 54 865 - -
Apr4g0507 865 Gene3D Glycogen Phosphorylase B; 583 810 - -
Apr4g0507 865 Pfam Glycosyl transferases group 1 621 795 IPR001296 GO:0016757
Apr4g0507 865 PANTHER - 54 865 IPR012820 GO:0005985|GO:0016157
Apr4g0507 865 Gene3D - 202 331 - -
Apr4g0507 865 Gene3D Glycogen Phosphorylase B; 336 853 - -
Apr4g0507 865 Pfam Sucrose synthase 62 609 IPR000368 GO:0005985|GO:0016157
Apr4g0507 865 TIGRFAM sucr_synth: sucrose synthase 78 859 IPR012820 GO:0005985|GO:0016157
Apr4g0507 865 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 351 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0507 Apr-Chr4 4219610 4225841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0507 56 863 Glycosyltransferase AT4G02280 83.540 0.0 1440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0507 K00695 - gmx:100793371 1542.71