Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0501 ATGGGAGAAAAGATGGACAGAATAGAACACAAAATTGTGAGTACCAATGGAATAAACATGCACGTGGCATCAATTGGGTCAGGCCCAGTAGTATTGTTCCTTCACGGCTTCCCTGAGCTATGGTATACGTGGCGTCATCAGCTTCTGTATCTCTCCGCCATGGGCTACCGGGCCATCGCCCCTGACCTCCGCGGCTACGGCGACACCGACGCGCCGCCCTCCGCTTCTTCTTATTCCGCCCTCCACATCGTGGGTGACCTGGTTGGGCTTCTGGATGGTTTGGGCATAGACCGTGTGTTTTTGGTGGGCCATGATTGGGGAGCTGCCATAGCCTGGTATTTCTGCTTGTTGAGGCCCGATCGTGTGAAGGCCTTGGTCAACATGAGTGTCGTTTTCCGTCCCAGGAACCCTACCAGAAAGCCCATTCCTACCTTGAGGGCTTTGATGGGTGATAATTACTATATATGCAGGTTTCAGCAACCTGGGGAGGCTGAAGAAGAGTTTGCCCGTGCCGGAACAGCAAGAATAATGAAGACATTTCTTTGCTCTCGTGATCCACGTCCACCCAGTGTCCCTAAGGAGATAGGATTTGGAGGTTCATCCAAACTTAATACTGCTTTACCTTCGTGGCTGTCTGAAGAAGATGTCAACTATTATGCCACCAAATTTGACCAGAAAGGCTTCACTGGCGGCCTAAACTATTATCGTGCTATGGACCTAACCTGGGAGCTCACAGCACCATGGACTGGAGTACAGATCAAGGTACCGGTCAAGTTTATTGTGGGAGACCTTGACATTACTTATAACACTCCAGGTGTTAGGGAGTATATACATAATGGTGGCTTTAAGAGAGAGGTGCCATTCTTGCAAGAATTGGTTGTGATGGAAGGAGTAGCTCACTTTATAAATCAGGAAAGACCAGAAGAAATCAGCGCACATATATACGACTTCATCAAGAAATTTTAA 966 0.4845 MGEKMDRIEHKIVSTNGINMHVASIGSGPVVLFLHGFPELWYTWRHQLLYLSAMGYRAIAPDLRGYGDTDAPPSASSYSALHIVGDLVGLLDGLGIDRVFLVGHDWGAAIAWYFCLLRPDRVKALVNMSVVFRPRNPTRKPIPTLRALMGDNYYICRFQQPGEAEEEFARAGTARIMKTFLCSRDPRPPSVPKEIGFGGSSKLNTALPSWLSEEDVNYYATKFDQKGFTGGLNYYRAMDLTWELTAPWTGVQIKVPVKFIVGDLDITYNTPGVREYIHNGGFKREVPFLQELVVMEGVAHFINQERPEEISAHIYDFIKKF* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0501 321 Pfam alpha/beta hydrolase fold 29 132 IPR000073 -
Apr4g0501 321 Gene3D alpha/beta hydrolase 5 321 IPR029058 -
Apr4g0501 321 PANTHER EPOXIDE HYDROLASE 5 321 - -
Apr4g0501 321 PRINTS Alpha/beta hydrolase fold signature 55 70 IPR000073 -
Apr4g0501 321 PRINTS Alpha/beta hydrolase fold signature 101 114 IPR000073 -
Apr4g0501 321 PRINTS Alpha/beta hydrolase fold signature 115 128 IPR000073 -
Apr4g0501 321 SUPERFAMILY alpha/beta-Hydrolases 3 320 IPR029058 -
Apr4g0501 321 PRINTS Epoxide hydrolase signature 35 53 IPR000639 GO:0003824
Apr4g0501 321 PRINTS Epoxide hydrolase signature 55 70 IPR000639 GO:0003824
Apr4g0501 321 PRINTS Epoxide hydrolase signature 101 114 IPR000639 GO:0003824
Apr4g0501 321 PRINTS Epoxide hydrolase signature 115 128 IPR000639 GO:0003824
Apr4g0501 321 PRINTS Epoxide hydrolase signature 255 271 IPR000639 GO:0003824
Apr4g0501 321 PRINTS Epoxide hydrolase signature 295 317 IPR000639 GO:0003824
Apr4g0501 321 PANTHER BIFUNCTIONAL EPOXIDE HYDROLASE 2-LIKE 5 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0501 Apr-Chr4 4173201 4175403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0501 5 321 Acyl Lipid Metabolism Gene Families AT4G02340 70.032 6.14e-179 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0501 - - gmx:100799903 578.17