Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0499 ATGCTCTCCTCCAAGCCACCGCGCCGGAAAATAGTTCCGGCGAACGGCGATGACTCCGCCGATAAACTGGACCAGCTTCTTCTCTCCTCCGCCATCTGCAACAACGAGGACTTAGGACCCTTCATCCGCAAAGCCTTTGCTTCCGGCAAGCCGGAGACGCTCCACCACCACCTCCGTCACTTCGCCCGCTCAAAAGAATCGGAGATCGAAGAGGTATGCAAGGCTCACTACCAAGACTTCATCCTCGCCGTCGACGACCTCCGATCCCTCCTTTCCGACGTCGATTCTCTCAAGTCTTCCCTCTTCGACTCTAACTCTAAGCTCCAATCCGTCGCTCGACCGCTCCTCTCCTCTCTCGACTCCTTCGTCGAAACGCGGAACGTCTCGAAGAACGTGAACCTGGCCATCGAATCGGTCCGGACGTGCATCAAGCTGACGGAGGTTTGCTCCCGAGCGAACCGCCACCTCTCCAACGACAACTTCTACATGGCGCTGAAGTGCGTGGACACGATCGAGAGGGAGTACTTGGACAAAACGGCGTCGTCAACGCTGAGGAGGATGATGGAGAAGAAGATTCCAGAGATTCGTTCGTACATAGAAAGGAAGGTAAACAAGGAGTTCGGGGACTGGTTGGTGGAGATCCGAGTGGTGAGTCGCAATTTAGGGCAATTGGCCATCGGTCAAGCCTCGTCGGCGAGGCAGAGAGAAGAGGATCTCAGAATCAAGCAGCGCCAAGCGGAGGAGCAGAGTAGGCTGAGCGTTAGGGACTGCATTTATGCTTTGGAGGAAGAGGATGAAGATGAAATCGCCGGTGGGATCGGAGAAGACGGTGGTGGAGTTGCAGGTTTTGATTTGACTCCGTTGTATAGGGCTTATCATATTCACCAGACGCTAGGGTTAGAAGATCGGTTTAAGCAGTATTATTTTGAGAATCGGAAGCTTCAGTTGACTTCGGACTTTCAGGTATCGTCGATGACGCCTTTTCTTGAGTCGCATCAAACATTCTTTGCGCAAATTGCGGGGTTCTTTGTGGTGGAGGATCGTGTGTTGAGGACTGGGGGTGGGTTGATATCAAAGATGGAAGTTGAGAATCTCTGGGAGATTGCTGTTAGCAAAATGTGTTCTGTGTTGGAGGATCAGTTCTCCAGAATGCAAACCGCTAATCACCTTTTACTTATTAAGGATTATGTGAGTCTGTTAGGAGTGACTCTGAGGAGATATGGGTACCCCATTGATGCCTTGCTTGATGTTTTGAGTAAACATAGGGATAAATATCACGAGCTGCTCTTGTCTGACTGTAGGAAGCAGATAGCGGAGGCTGTTGCTGCCGATAAGTTTGAGCAGATGTTGATGAAGAAGGAGTACGAGTATTCGATGAATGTGCTTTCTTTTCAGATACAAACATCGGATATCATACCTGCTTTTCCTTATGTTGCACCATTTTCATCCACCGTGCCTGATTGTTGTCGCATTGTGCGGTCCTTCATTGAGGATTCTGTGAGTTTCATGTCATACGGCGGGCAGCTTGAGTTCTATGAAGTTGTTAAGAAATATTTAGACAGGCTTTTGAGCGAGGTTTTGGATGAAGCATTATCAAAGCTTATCAATACAGCGATTAGTGGTGTTTCCCAGGCAATGCAAATGGCAGCAAATATGGCTGTACTGGAACGTGCGTGTGATTTTTTCTTTCGCCATGCCGCACAGCTTTCGGGGGTTCCCTTGAGACTGGTTGAGAGAAGCAGAAGGCAGTTCCCTCTGAAAAAAGCTCGTGATGCTGCAGAAGAGATGCTCTCTGGGTTACTCAAGGCCAAAGTTGATGGATTTATGTCCTTGATTGAGAATGTGAACTGGATGAGTGATGAAGCGCCTCAGAGTGGAAATGAATATGTAAACGAGGTCATAATTTATTTGGAAATTTTGTTTTCAACTGCTCAACAGATATTGCCATCTCAAGTCCTTAAAAGAGTTTTACAGGAAGTTTTTGCTCACATATCGGAGAAGATAGTTGGAACTTTAGTTAGTGACTCTGTTAAGAGGTTTAATGTGAATGCTATTACTGGAATTGATGTAGACATCCGGCTTTTAGAATCATTTGCTGATAATCAGGGTCCCCTTTTCTCTGATGGGGATGTTGATGTGCTGAAAACATCACTTGCTGAGTCAAGGCAATTGATTAATTTGCTGTTAAGCAATCATCCGGAGAACTTCTTGAATCCAGTAATCAGGGAGAGGAGTTACAATACTTTGGACCACAAAAAAGTGATGATTATTTCAGAAAAGTTGAGAGATCCTTCTGATAGGCTCTTTGGAACCTTTGGTAGTCGTGGGGCCAGGCAGAATCCGAAAAGGAAATCGTTGGATACATTGATAAAAAGACTTAAGGATGTTAGCTGA 2394 0.4687 MLSSKPPRRKIVPANGDDSADKLDQLLLSSAICNNEDLGPFIRKAFASGKPETLHHHLRHFARSKESEIEEVCKAHYQDFILAVDDLRSLLSDVDSLKSSLFDSNSKLQSVARPLLSSLDSFVETRNVSKNVNLAIESVRTCIKLTEVCSRANRHLSNDNFYMALKCVDTIEREYLDKTASSTLRRMMEKKIPEIRSYIERKVNKEFGDWLVEIRVVSRNLGQLAIGQASSARQREEDLRIKQRQAEEQSRLSVRDCIYALEEEDEDEIAGGIGEDGGGVAGFDLTPLYRAYHIHQTLGLEDRFKQYYFENRKLQLTSDFQVSSMTPFLESHQTFFAQIAGFFVVEDRVLRTGGGLISKMEVENLWEIAVSKMCSVLEDQFSRMQTANHLLLIKDYVSLLGVTLRRYGYPIDALLDVLSKHRDKYHELLLSDCRKQIAEAVAADKFEQMLMKKEYEYSMNVLSFQIQTSDIIPAFPYVAPFSSTVPDCCRIVRSFIEDSVSFMSYGGQLEFYEVVKKYLDRLLSEVLDEALSKLINTAISGVSQAMQMAANMAVLERACDFFFRHAAQLSGVPLRLVERSRRQFPLKKARDAAEEMLSGLLKAKVDGFMSLIENVNWMSDEAPQSGNEYVNEVIIYLEILFSTAQQILPSQVLKRVLQEVFAHISEKIVGTLVSDSVKRFNVNAITGIDVDIRLLESFADNQGPLFSDGDVDVLKTSLAESRQLINLLLSNHPENFLNPVIRERSYNTLDHKKVMIISEKLRDPSDRLFGTFGSRGARQNPKRKSLDTLIKRLKDVS* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0499 797 PANTHER SEC15 7 797 IPR007225 GO:0006886|GO:0090522
Apr4g0499 797 Pfam Exocyst complex subunit Sec15-like 457 761 IPR046361 -
Apr4g0499 797 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 589 736 IPR042044 -
Apr4g0499 797 ProSiteProfiles Munc13-homology domain 2 (MHD2) profile. 627 740 IPR014772 -
Apr4g0499 797 PANTHER EXOCYST COMPLEX COMPONENT SEC15B 7 797 - -
Apr4g0499 797 PIRSF Sec15 5 797 IPR007225 GO:0006886|GO:0090522
Apr4g0499 797 Gene3D - 411 582 IPR042045 -
Apr4g0499 797 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0499 Apr-Chr4 4160834 4165535 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0499 K19985 - gmx:100796432 1428.69