Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0486 ATGGAAACCAGTTCAGACATGGATGTGGAGGAACAACCTTCACCCAACTCCAACAACGTTAAACGCTTCGGCCTTAAAAACTCTATTCAAACCAACTTCGGCGACGACTATGTTTTCCAAATTGTCCCAAAGGATGATTGGAGTTCAATGGCAGTGTCATTGTCGACAAACACAGTGAAACTGTATTCGCCGGTTGGGGGTCACTATTATGGAGAGTGCAAGGGTCACACTGCAACAATCAATCAGATTTTGTTTTTGGGTCCTTCCAATCCCAATGTTCTAAGCTCTTGTTCTTCTGATGGTACTATTAGAGCTTGGGACACTAGAACACTTCAGCAGGTTTCTTCCATCAATACGGGTTCTTCTCAAGAGGTTTTCAGCTTCTCTGTTGGAGGGACTAGTGGAAATTTAATTGCTGCTGGTTGTAAATCGCAGATACTCTTCTGGGATTGGAGAAATAAGAAGCAAATTGCATGCCTGGAGGACTCTCATGTGGATGATGTCACTCAGGTTCATTTTGTCCCTGATGAGCAAGACAAGCTTATTTCTGCTTCAGTAGATGGATTGATCTGCACATTTGATACCACTGGAGATATCAATGACGATGATCATCTAGAATCAGTGATTAATGTGGGGACTTCAATTGCAAAGGTGGGGATTTTTGGAGAAAGTTACCGGAAGCTTTGGTGTCTAACACACATTGAAACCCTAGGTATCTGGAACTGGAAAGATGGTACAAATGAAGTAAATTTCTCAGATGCTCGTACTTTAGCCTCTGAAAGTTGGAGTTTGGATCATGTTGACTATTTCGTTGATTGTCACTACTCTGCTGAAGCTGAAAAACTATGGGTGATTGGTGGCACTAATGCTGGTACTTTGGGCTACTTTCCTGTAAATTACAATGGAATGGCAACAATTGGAACTGCAGAAGCAATTCTAGAGGGTGGCCACACAAGTGTTATTAGGAGTGTTTTACCCATGTCAAGAATTCATAGTAATAGTCCTAGCCAAGGCATTTTTGGATGGACTGGTGGTGAAGATGGTCAGCTTTGTTGTTGGCTCTCTGATGATTCCTCTCAAATAAATCGATCTTGGATTTCAAGTACGTTGATTGTGAGGCCAGAAAGAACATGCAAGAAAAATCGTCACCATCCCTACTAG 1161 0.4212 METSSDMDVEEQPSPNSNNVKRFGLKNSIQTNFGDDYVFQIVPKDDWSSMAVSLSTNTVKLYSPVGGHYYGECKGHTATINQILFLGPSNPNVLSSCSSDGTIRAWDTRTLQQVSSINTGSSQEVFSFSVGGTSGNLIAAGCKSQILFWDWRNKKQIACLEDSHVDDVTQVHFVPDEQDKLISASVDGLICTFDTTGDINDDDHLESVINVGTSIAKVGIFGESYRKLWCLTHIETLGIWNWKDGTNEVNFSDARTLASESWSLDHVDYFVDCHYSAEAEKLWVIGGTNAGTLGYFPVNYNGMATIGTAEAILEGGHTSVIRSVLPMSRIHSNSPSQGIFGWTGGEDGQLCCWLSDDSSQINRSWISSTLIVRPERTCKKNRHHPY* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0486 386 Pfam WD domain, G-beta repeat 72 107 IPR001680 GO:0005515
Apr4g0486 386 ProSitePatterns Trp-Asp (WD) repeats signature. 94 108 IPR019775 -
Apr4g0486 386 ProSiteProfiles Trp-Asp (WD) repeats profile. 73 116 IPR001680 GO:0005515
Apr4g0486 386 SUPERFAMILY WD40 repeat-like 35 353 IPR036322 GO:0005515
Apr4g0486 386 MobiDBLite consensus disorder prediction 1 21 - -
Apr4g0486 386 PANTHER UNCHARACTERIZED 21 386 IPR039328 -
Apr4g0486 386 Gene3D - 4 218 IPR015943 GO:0005515
Apr4g0486 386 SMART WD40_4 110 150 IPR001680 GO:0005515
Apr4g0486 386 SMART WD40_4 153 194 IPR001680 GO:0005515
Apr4g0486 386 SMART WD40_4 66 107 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0486 K24758 - gmx:100794786 702.59