Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0484 ATGGAGTTGATGAGTCATTGTTCAAGCTTCCTTCTTCCGCCGGAGAACTGCAACCCCACTTGTTCTATTTCCCTCAACTACGCTCTCGTTGTTCTCAATCAAAGCCTCCCCAGATTCGCTCCTCTGCTTTGGGACCACGCACAACTACGGGTGTGCGCAGATGGAGGTGCCAACAGGGTGTATGATGAAATGCCTCTTTTCTTCCCTCAGCAACAACCTTCCCATGTTCGCACTAGGTCAAATTTTCTCTATCTGACTTCCGATGTTTCTATCAGGTACAAGCCTGATGTAATTAAAGGTGACATGGATTCAATCAGGACAGAAGTACTTGAATTCTATAAAAAGCTGGGAACTCAGATAATTGATGAGTCTCATGATCAGGACACCACAGATTTACACAAATGTGTAACATACATACGTGACCTCACACCAAGTATTGATCAATCAGCACTATGCATTCTTGTTGCTGGAGCACTTGGTGGGAGATTTGACCATGAGATTGGAAATATTAATGTGCTCTGCCGATTCTCCAACACACGAATTATCCTTCTATCTGATGATTGCCTCATTCACCTTCTCCCAAAGAATCATTGTCATAAGATCCTTATTCAATCTTCTGTTGAGGGTCCACATTGTGGACTAGTTCCCATTGGCATGCCATCTGGAAGTTCTACAACCACAGGACTCAAGTGGGACCTTAATGACATGGCGATGAGATTTGGAGGTTTAATAAGCACATCAAATATCGTAAAAGGGGATATAGTTACAGTACAGTCTGATTCAGATCTTCTTTGGACTATTTCTATCAAGAAGCTCTAG 819 0.4286 MELMSHCSSFLLPPENCNPTCSISLNYALVVLNQSLPRFAPLLWDHAQLRVCADGGANRVYDEMPLFFPQQQPSHVRTRSNFLYLTSDVSIRYKPDVIKGDMDSIRTEVLEFYKKLGTQIIDESHDQDTTDLHKCVTYIRDLTPSIDQSALCILVAGALGGRFDHEIGNINVLCRFSNTRIILLSDDCLIHLLPKNHCHKILIQSSVEGPHCGLVPIGMPSGSSTTTGLKWDLNDMAMRFGGLISTSNIVKGDIVTVQSDSDLLWTISIKKL* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0484 272 Pfam Thiamin pyrophosphokinase, catalytic domain 42 181 IPR007371 GO:0004788|GO:0005524|GO:0009229
Apr4g0484 272 SUPERFAMILY Thiamin pyrophosphokinase, substrate-binding domain 191 271 IPR036371 GO:0009229
Apr4g0484 272 Pfam Thiamin pyrophosphokinase, vitamin B1 binding domain 199 264 IPR007373 GO:0009229|GO:0030975
Apr4g0484 272 PIRSF TPK1 1 272 IPR016966 GO:0004788|GO:0005524|GO:0009229
Apr4g0484 272 Gene3D - 181 271 - -
Apr4g0484 272 SMART TPK_B1_binding_a_2_a 199 263 IPR007373 GO:0009229|GO:0030975
Apr4g0484 272 CDD TPK 28 267 IPR007371 GO:0004788|GO:0005524|GO:0009229
Apr4g0484 272 TIGRFAM thi_PPkinase: thiamine pyrophosphokinase 29 267 IPR006282 GO:0004788|GO:0006772
Apr4g0484 272 SUPERFAMILY Thiamin pyrophosphokinase, catalytic domain 24 189 IPR036759 GO:0004788|GO:0005524|GO:0009229
Apr4g0484 272 PANTHER THIAMIN PYROPHOSPHOKINASE 3 270 - -
Apr4g0484 272 PANTHER THIAMINE PYROPHOSPHOKINASE 1 3 270 - -
Apr4g0484 272 Gene3D Thiamin pyrophosphokinase, catalytic domain 25 180 IPR036759 GO:0004788|GO:0005524|GO:0009229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0484 K00949 - gmx:100795320 486.108