Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0483 ATGTTAGATAAGTGCTTGGGAGCACAGAGGGCAAGAAGATTCCAGAGAGCTTTCAGGCATTGCAAGATTACCATCCTCTGCCTCGTCCTCACCGTTGTTGTCCTGCGAGGCACCATCGGCGCCGGCAAGTTCGGCACGCCGGAGCAAGATTTCGTCGACATTCGCAACCGCTTCTACTCCCGGAAGCTCCCCGACCCTCATCGCCTTCTCGGGGAGCTTCATTCTAAGATGTCGTTTTCGTCTTCCTCTAATTCCGATACTTCCACTTCCGCTAACAATTACAACGCCTTCGACATTAACACCACATTGGTCGGCGACGAAGAAGAAGAAGAAAGCAACCGCGAGAAACGAAACCCGAACGAGCCTTATCGTCTTGGCCCCAGAATCTCGGATTGGGATGAACAGAGATCGAGGTGGCTTCGCGAAAACCCCAATTTCTCGAATTTCTTTCGACCCAACAAGCCTCGTGTGCTTTTGGTAACTGGTTCGTCACCGAAACCGTGTGAGAATCCCGTCGGGGACCATTACTTGTTGAAGTCTATAAAGAACAAGATTGATTATTGTCGTTTGCATGGTATTGAGGTGTTTTACAACATGGCCCTTCTCGATGCTGAAATGGCTGGGTTTTGGGCCAAGCTTCCTTTGATTAGGAAACTTCTTCTGTCTCACCCTGAGGTAGAGTTCTTGTGGTGGATGGATAGTGATGCCATGTTCACGGACATGGGGTTTGAAGTGCCGTGGGAGAGGTATAAAGAGTATAATTTGGTAATGCATGGGTGGAATGAGATGGTTTATGATCAGAAGAATTGGATCGGGTTGAACACTGGAAGCTTTTTGTTGAGAAATTGTCAGTGGTCTTTGGATATTCTTGATGCTTGGGCTCCAATGGGACCAAAAGGGGAGGTTAGAGATGAGGCTGGGAAAGTGCTTACACGTGAGCTCAAGGACAGGCCAGTTTTTGAAGCTGATGATCAATCTGCTATGGTATATTTGTTGGCAAAAGAGAGGGATAAATGGGGTGATAAGGTTTATCTTGAGAATGGTTATTACTTGCATGGTTATTGGGGTATTTTGGTTGATAAGTATGAGGAGATGATTGAGAATTACCATCCTGGATTTGGTGACCATAGGTGGCCGTTGGTGACACATTTTGTGGGTTGCAAGCCATGTGGAAAGTTTGGCGATTACCCGGTTGAGAGATGCTTGAAGCAGATGGACAGAGCTTTCAATTTTGGGGATAATCAGATACTACAGATTTATGGCTTCACACACAAGTCCTTGGCTAGTAGGAGAGTAAATAGAATAAGGAATGAGACTAGCAATCCTCTTGAGGTCAAAGATGAACTTGGCTTGCTTCATCCGGTATTTAAAGCAGTGGAGGTATCATCATCTAGCTGA 1398 0.4628 MLDKCLGAQRARRFQRAFRHCKITILCLVLTVVVLRGTIGAGKFGTPEQDFVDIRNRFYSRKLPDPHRLLGELHSKMSFSSSSNSDTSTSANNYNAFDINTTLVGDEEEEESNREKRNPNEPYRLGPRISDWDEQRSRWLRENPNFSNFFRPNKPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRLHGIEVFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMGFEVPWERYKEYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGEVRDEAGKVLTRELKDRPVFEADDQSAMVYLLAKERDKWGDKVYLENGYYLHGYWGILVDKYEEMIENYHPGFGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQILQIYGFTHKSLASRRVNRIRNETSNPLEVKDELGLLHPVFKAVEVSSSS* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0483 465 Pfam galactosyl transferase GMA12/MNN10 family 154 393 IPR008630 GO:0016021|GO:0016757
Apr4g0483 465 MobiDBLite consensus disorder prediction 105 127 - -
Apr4g0483 465 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 153 303 IPR029044 -
Apr4g0483 465 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 4 464 IPR008630 GO:0016021|GO:0016757
Apr4g0483 465 MobiDBLite consensus disorder prediction 107 127 - -
Apr4g0483 465 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE-RELATED 4 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0483 Apr-Chr4 4027261 4028658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0483 1 465 Glycosyltransferase AT3G62720 77.253 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0483 K08238 - gmx:100794266 835.869